| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1623 |
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| Symbol | |
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| ID | 2687167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1778047 |
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| End bp | 1779420 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637126303 |
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| Product | glycolate oxidase subunit GlcD, putative |
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| Protein accession | NP_952674 |
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| Protein GI | 39996723 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.151962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTT CATTCATTAG CGAACTGAAG AGCATAGTCG GCGAGGAACA CACCCTCGCC
GACAAGGAAA GCCTCGCCTG TTACGGCTAT GATTCAACGC CGGAGTATGA AAGCCGGCCC
GGAGCGGTGG TCCTTCCCGC CAACGAGGAG GAGATCTGCC GGATCATGGC CCGCTGCCAT
GCCGCAGGGG TCCCCGTGAC TCCTCGCGGC TCCGGAACCA ACCTGTCCGG AGGCTCTCTG
GGCCGCCCCG AAGGGGTTGT CGTTCAGACG AGCCGGCTGA ACAGCATCGT TGAAATCGAC
GAGGAAAACC TGACCGCCAC TGTCCAGCCC GGCGTCGTAA CCAGCGCACT GCACCGGGCA
GTGGAAGCAA AGGGGCTCTT CTATCCGCCC GATCCGGGCA GCATGAACAT CTCCACCATC
GGCGGCAACG TGGCCGAAAA CGCCGGTGGC TTGCGGGGCC TCAAATACGG AGTCACTGCC
GACTATGTCA TGGGGCTCCA CACCGCTCTA CCCGACGGCA GCCTCCTGCG GACCGGCGGC
AAAGCCGTAA AGGACGTTGC CGGCTATAAC CTGAACCAGC TCCTCGTCTC TTCCGAGGGG
ACCCTCGGGC TCTTCACCGA AGTGACTGTT AAACTGATTC CCAAGCCCCA AGCCAAGAAG
ACGATGCTCG TCCATTTCCC GGTGCTGGAA AACGCGGCCC TGGCAGTCTC CCATATCGTG
GCCGCCCGGG TCATTCCGGC CACACTTGAG TTCATGGACC GGGTCACGGT CAAGTGTATC
GAGGATTACG CCAAGGTGGG CCTGCCCCTG GATGTGGAGG CCGTGCTCCT CATCGAAGTG
GACGGTCATC CGGCCCAGGT GGAGGAAGAC GCAGTCGCGG TCCGGCGGAT CTGCGCCGAG
CACCATTGTT CGTCGTTCCA GACCGCGGCC GACGCCGACG AGGCTCTCAA GCTCGCTACT
GCCCGGCGGG TGGCCCTTTC GTCCCTGGCC CGGGTCAAGC CCACCACTAT CCTTGAGGAC
GCCACTGTCC CCCGGAGCTG CATTGCCCCC ATGGTCAAGT TTATCCAGGA CACGGCCCGG
AAGTACAATC TCACCATCGG CACCTTCGGC CATGCCGGCG ACGGCAACCT TCATCCCACT
TGCCTCACCG ACGAGCGGGA TAAGGATGAG ATCGCCCGGG CTCACAAGGC GTTCGAGGAA
ATCTTTGATA CGGCTCTCGC CATGGGGGGA ACTATCACCG GCGAGCATGG CGTGGGGCTT
TCCAAGAAAA AGTATCTCCC GCGGCTTGTG GGAGAGTCCG GGATACGGGT GATGCAGGGG
ATCAAGCAGG CATTCGATCC GACGGGAATC CTGAATCCGG GGAAGGTGTT CTAG
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| Protein sequence | MDVSFISELK SIVGEEHTLA DKESLACYGY DSTPEYESRP GAVVLPANEE EICRIMARCH
AAGVPVTPRG SGTNLSGGSL GRPEGVVVQT SRLNSIVEID EENLTATVQP GVVTSALHRA
VEAKGLFYPP DPGSMNISTI GGNVAENAGG LRGLKYGVTA DYVMGLHTAL PDGSLLRTGG
KAVKDVAGYN LNQLLVSSEG TLGLFTEVTV KLIPKPQAKK TMLVHFPVLE NAALAVSHIV
AARVIPATLE FMDRVTVKCI EDYAKVGLPL DVEAVLLIEV DGHPAQVEED AVAVRRICAE
HHCSSFQTAA DADEALKLAT ARRVALSSLA RVKPTTILED ATVPRSCIAP MVKFIQDTAR
KYNLTIGTFG HAGDGNLHPT CLTDERDKDE IARAHKAFEE IFDTALAMGG TITGEHGVGL
SKKKYLPRLV GESGIRVMQG IKQAFDPTGI LNPGKVF
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