| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1616 |
|---|
| Symbol | |
|---|
| ID | 2687433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 1769602 |
|---|
| End bp | 1770831 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637126296 |
|---|
| Product | ImpB/MucB/SamB family protein |
|---|
| Protein accession | NP_952667 |
|---|
| Protein GI | 39996716 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC ATCGAACCAT TCTCCATCTG GACATGAACG CCTTTTTTGC CTCGGTTGAG
CAACAAGCAG ACCCATCCCT CCAAGGAAAG CCAGTTGCGG TCATCGGGTC AGGCGCGCGC
ACCATCATCA CTACCGCATC CTACGAGGCA CGCGCCCACG GGGTCGGCAC GGGCATGACA
ACCCACGAAG CAAAACGGCT CTGCCCGGAA TTGATCCTCG TTATCGGCAA CAACCGGGAA
TACACCCGTA TTTCAAAACT GATCTTCGAA ATGCTCGGGC AATTCACCCC CCTTGTGGAA
GTCTTTTCCA TTGACGAAGC CTTTCTCGAC TTGACCGGTT CGCTTCGACT TTTCGGCCGC
GCCGACGTGA TTGCCCGCGA GATCAAAGCC CGCATAAGGG ACCGATTCGG CCTCACCTGC
TCCATCGGCA TCGCTCCCAA CAAGCTTTTG GCAAAGCTGG CCTCGGACAT GCAAAAGCCC
GATGGTCTCA CCATCATCCC CCCCGAAAAC GTGGCTTCAC TCATGAAAAC GACCCCGATC
CGCAGCCTCT GCGGAATAGG CCCATCCACT GAACAACGAC TGAAATACCT CGGCATTTCA
ACCTGTAACG ATCTGGGACA CTTCAGCTCC AAGATACTTA CCCGACATTT CGGTGCCATG
GGAGCACGAC TCAAACAGAT GGGACAGGGC ATTGACGACT CTCCCGTAAT ACCGACCACA
ACGGAAGAAG AAGTTAAAAG CGTCAGCCAC AGTACAACCC TGGACCACGA CCTCACCAAC
AAGGACGACA TACATAAGTA CCTGCTTATG TTATCGGAGA TGGTAGGACG CCGCGCGCGC
CGCTACAAAA CCAAAGGGAA AACAGTTACC CTAACAATAC GGTATGCCGA TTTCACCACG
TTCAGCCGCC AGGAAACCCT CCCCTCCCCA TTGAATCGAA GCGGCGACAT TTATCGAGCC
GTCACTGCAC TGCTCGACAC ACTCCAATTA ACGCAACCAA TACGACTCCT GGGCGTTGCC
ATCAGCAACC TTGTACATGC CTCGGAACAG CTCCCCCTCT TCCCGGAAGA ACGGCGGCTC
ACAACCCTCT CGCAAGCCAT GGATCAAGTC AATGACCGGT TCGGAGAAAC CACCATCACC
TTTGGCACCT TGCTGGGACA AGACAACTGC TCGCACGTTA TCGCCCCTGC CTGGAGACCC
GCTGGCATAC GTGACGTAAA AGTAAAATAA
|
|---|
| Protein sequence | MSNHRTILHL DMNAFFASVE QQADPSLQGK PVAVIGSGAR TIITTASYEA RAHGVGTGMT
THEAKRLCPE LILVIGNNRE YTRISKLIFE MLGQFTPLVE VFSIDEAFLD LTGSLRLFGR
ADVIAREIKA RIRDRFGLTC SIGIAPNKLL AKLASDMQKP DGLTIIPPEN VASLMKTTPI
RSLCGIGPST EQRLKYLGIS TCNDLGHFSS KILTRHFGAM GARLKQMGQG IDDSPVIPTT
TEEEVKSVSH STTLDHDLTN KDDIHKYLLM LSEMVGRRAR RYKTKGKTVT LTIRYADFTT
FSRQETLPSP LNRSGDIYRA VTALLDTLQL TQPIRLLGVA ISNLVHASEQ LPLFPEERRL
TTLSQAMDQV NDRFGETTIT FGTLLGQDNC SHVIAPAWRP AGIRDVKVK
|
|---|
| |