| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0896 |
|---|
| Symbol | tldD |
|---|
| ID | 2687285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 960231 |
|---|
| End bp | 961613 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637125568 |
|---|
| Product | tldD protein |
|---|
| Protein accession | NP_951952 |
|---|
| Protein GI | 39996001 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0420634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACC AGATGAACCT ATCCGCCATC CTGCGACAGG CCCTCGCGGG CGGCGGTGAA
TTCGCGGAGA TTTACTTCGA AGAAGGCTCC ACCACCGCAG TATTCTGCGA GGACGGAAAA
ATCGAGAAGG TCCTCGCCGG AACGGACCGC GGGGTGGGGA TCCGGGTCAT TTCCGATCTC
CGCACCGCCT ACGCGTACAC CAACGAGGTG ACCGGCACCG CCCTCATGGA ACTGGCCACA
ACGGTGAGCA GGGCAGTGCG GGGCAAGGTC TTTGAGCAGA CCATCGCAAT GAAACCGAGG
GCAGTGGGGG CAGGGTTCCC CATAGAAATT ACGCCAGATG GCGTAGCTCT CCATGAAAAA
ATTGCACTGG TGGAGAGAGG CAACAAGGCT GCCCGCGACA TCAGCGAAAC AATTCGGCAA
GTTACAATTG CCTATCGCGA CAGCCGAGTG AAATGCCAGA TCGCCAATTC ACTGGGCGAC
TTCATCGAAA CCAATCGGAC GGGCACCCTG TACCTGGCCC ATGTGGTTGC TGCTGGCGCG
GACGTGATCC AGACCGGCTA TGAAGCAACG GGGAAATTCA TGGGCCACGA GATCTTCCGG
GAGCGCCCCC CCGAAGAGAT CGCCCGTGCC GCCGCCCGCC GGGCGGTCAT GATGCTCGGC
GCGCGCAAGG CGCCGGGAGG GCTGATGCCG GTGGTCCTCT CGTCGGAGGC CGGCGGCACC
ATGGTGCACG AGGCAATCGG CCACGGCCTT GAGGCGGACC TGGCCGGCAA CGGCCTGTCG
GTCTACACGG GAAAAGTGGG GCAACAGGTG GCATCGCCCC TGGTGACGGT GATCGACGAC
GCCACCATCC CCAACGCGCG GGGCTCGTTC TCCTTCGACG ATGAGGGAAC CCCGGCCCAG
CGCACGGTAC TGGTGGAGAA CGGCATCCTG AAAGGGTATC TCTACGACCG GCTGTCCGCC
ATGAAGGACG GCTGCGCCTC CACGGGCAAC GGCAGGCGCG AGGGGTACCA CACCAAGCCC
ATCGTCCGGA TGACCAACAC CCTCATTGCC CCCGGCGAGT CGGACCCGGA GGAGATCGTG
CGGGGGGTCG GCCAGGGACT CTTCGTCCGC AAGATGGGCG GCGGGCAGGT AAATACGGTA
AACGGCGACT TCGTGTTCGA AGTCACCGAA GGATATCTTA TTGAAAATGG AGCCATCGGG
GAACCGGTCA GGGGAGCCAC CCTTACCGGC AACGGCCCGG ACATTCTCAA GAAGATCGTC
AAGGTCGGCA GCGATCTCGG CTTCGGCATC GGGACCTGCG GCAAGGACGG TCAGGGTGTG
CCGGTCTCCG ATGCCCAACC GACGCTTCTC ATCGACGAAA TAACGGTGGG CGGCGCGGCA
TGA
|
|---|
| Protein sequence | MLDQMNLSAI LRQALAGGGE FAEIYFEEGS TTAVFCEDGK IEKVLAGTDR GVGIRVISDL
RTAYAYTNEV TGTALMELAT TVSRAVRGKV FEQTIAMKPR AVGAGFPIEI TPDGVALHEK
IALVERGNKA ARDISETIRQ VTIAYRDSRV KCQIANSLGD FIETNRTGTL YLAHVVAAGA
DVIQTGYEAT GKFMGHEIFR ERPPEEIARA AARRAVMMLG ARKAPGGLMP VVLSSEAGGT
MVHEAIGHGL EADLAGNGLS VYTGKVGQQV ASPLVTVIDD ATIPNARGSF SFDDEGTPAQ
RTVLVENGIL KGYLYDRLSA MKDGCASTGN GRREGYHTKP IVRMTNTLIA PGESDPEEIV
RGVGQGLFVR KMGGGQVNTV NGDFVFEVTE GYLIENGAIG EPVRGATLTG NGPDILKKIV
KVGSDLGFGI GTCGKDGQGV PVSDAQPTLL IDEITVGGAA
|
|---|
| |