Gene GSU0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU0678 
Symbol 
ID2685436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand+ 
Start bp711520 
End bp712197 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID637125350 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_951735 
Protein GI39995784 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.586556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACG CAATCATCCG GACGGAAAAC CTGACCAAAA CGTACGGCTC CGGCCAGGTC 
ACCACCCACG CCCTGCGGGG AGTGAGCCTG GAGATCCCGC GCGGCGCGTT CTGCGCCATC 
GTGGGGCCTT CGGGGCACGG TAAAAGCACC CTCATGCATC TGGTGGGAGG GCTCGATCGG 
CCTTCGGCCG GCCAGGTGGC AGTGGACGGC ATCGAGCTGA CCGGTCTTGC CAACAGTGAC 
CTGGCGCGGC TGCGGGCCGA GAAGATCGGC TTCGTGTTCC AGTTTTTCAA CCTTTTGGGC 
AGTCTCACGG CCGAGGAGAA TGTGGCTGCT GCCATGATGT TCGCGGGCAT CCCGGAAAAA 
CAGCAAAAGG AACGGGCCCG GGAATTGCTG GAACTGGTGG GGCTCGGAGA GAAGCTGGGC 
GCACGGCCCC GCCAGCTTTC CGGGGGCCAG CAGCAGCGCG TGGCCATTGC CCGTGCTCTG 
GCCAACGACC CCGATATCCT CCTGATGGAC GAGCCCACGG GCAACCTGGA TTCGGCCGCA 
GAAGCCGAGG TGCTGGCGGC CGTGGCTGAG CTCCACCGTC AGGGGAAGAC GGTGGTGATC 
GTCACCCACA ACCCGGAGAT CGCCCGCCAG GCCCAGATGG TGGTGGAGAT CAGGGACGGC 
CGGCTGGCCT CGGCCTGA
 
Protein sequence
MSDAIIRTEN LTKTYGSGQV TTHALRGVSL EIPRGAFCAI VGPSGHGKST LMHLVGGLDR 
PSAGQVAVDG IELTGLANSD LARLRAEKIG FVFQFFNLLG SLTAEENVAA AMMFAGIPEK 
QQKERARELL ELVGLGEKLG ARPRQLSGGQ QQRVAIARAL ANDPDILLMD EPTGNLDSAA 
EAEVLAAVAE LHRQGKTVVI VTHNPEIARQ AQMVVEIRDG RLASA