| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0574 |
|---|
| Symbol | |
|---|
| ID | 2685710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 602546 |
|---|
| End bp | 603472 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637125240 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_951632 |
|---|
| Protein GI | 39995681 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.421422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAG CATCGAGAGC CCATGCCGAT TCGCGGCACG GGCTTTTTCT CATCCTTTTT
TCGGCCATGC TCTGGGGAAC CGTGGGCATC ACCACCAAGG CCCTCTACGG CCTGGCCGAC
ACAACTCCCC TTTCCATAGG CTTTTTCCGG CTGGCGCTGG CCGTGCCCGT GCTCGTGGCG
GCCTGCCGGC TCGCCACCGG TCCGGCCATG TTCCGGGTGG CGCGGCGCGA CCTGGGCACC
ATGATTGTGG TGGGGGCCAT GACGGCCCTC TACCAGGTTT GCTATTTCGC GGCCATCCGC
CAGATCGGCG TGGCAGCCGC CACGCTCGTC ACCCTCTGCA CGGCGCCGGT GATCGTGGCG
CTTCTTTCCG CCATCCTGAC CGGCGAGCGA CCCTCGGGCC GGGTGCTCCT CTCCCTGGCC
TGCGCCCTGG CCGGCACGGC GCTCCTGGTG GGGCTGCGGC CGCTGGCCGG CGAAGGGGGC
AACATCCCCC TGGGGATTGC CCAGGCCCTC GGCTCGGCCT TCAGCTATGC CTCGGTGACC
GTGGCCAGCC GTACCCTGGC GGGCCGCTAC CACCCGCTCC AGCCGGTGGC CATCGGTTTT
GCCGCGGGCG CCCTGTTCCT GCTTCCCACG GCCCTGGCCG ACGGCCTGGT GCTGACCTAT
CCGGCCGCGG GCTGGGTGCT GCTCCTCTAC CTGGGGGTGG TACCCACGGC CCTGGCCTAT
GCCCTTTTTC TGGCGGGCAT GCGGACCACC ACGGCCACGG CCGCGAGTAT CTGCACCCTT
CTGGAGCCGC TGGTGTCGAC GGTCCTGGCC TGGCTCATCT TCGGCGAACG GCTGGGTCCG
CTCGGCGCCG TCGGCGCGGT CCTCTTGTTC GGGGCCATCG GCCTCCTGGC CCGGCCGGTC
CGCCGCCGTC AGTCTTCAGC TGCCTGA
|
|---|
| Protein sequence | MQTASRAHAD SRHGLFLILF SAMLWGTVGI TTKALYGLAD TTPLSIGFFR LALAVPVLVA
ACRLATGPAM FRVARRDLGT MIVVGAMTAL YQVCYFAAIR QIGVAAATLV TLCTAPVIVA
LLSAILTGER PSGRVLLSLA CALAGTALLV GLRPLAGEGG NIPLGIAQAL GSAFSYASVT
VASRTLAGRY HPLQPVAIGF AAGALFLLPT ALADGLVLTY PAAGWVLLLY LGVVPTALAY
ALFLAGMRTT TATAASICTL LEPLVSTVLA WLIFGERLGP LGAVGAVLLF GAIGLLARPV
RRRQSSAA
|
|---|
| |