Gene GSU0441 details

Gene Information

• Locus tag: GSU0441
• ID: 2686372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 472705
• End bp: 473790
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637125107
• Product: radical SAM domain-containing protein
• Protein accession: NP_951500
• Protein GI: 39995549
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR00423] radical SAM domain protein, CofH subfamily

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATTT CATTGGCGAC AATTAGCGGC CGGGTCCATG CCGGCGAACG GATCAGCGAC 
GAGGAGGCCC TGTTCCTCTT CGAGAGCCGC GACCCCCTGG CCGTGGGAGA ACTGGCCGCA 
GCCGTCAACC GCCGCCGCAA CGGCGACCGG GTCTTCTTCA ACGTGAACCG GCACATCAAC 
CACACGAACA TCTGCGTCAA CCGCTGCTCC TTCTGTGCCT TCTACCGCGC CGCCGACGAG 
CCGGGGGCAT ACCTCTACGA CCTGGAGGAG ATCCGCAACC GCGCGGCCGA GGCCCACGCC 
CAGGGTGCCA CCGAGATTCA CATCGTGGGC GGCCTCCACC CCGATCTTCC CTTCGACTTC 
TATCTCGCCA TGCTCCGGAC CGTGAAGGAG GTCTCCCCGG ACCTCCACGT GAAGGCCTTT 
ACCGCGGTTG AGATCGAGTA CCTGTCGCGG CTCGCCGGCC TTTCGACGGC CGAAACCCTG 
ACAGTGCTGA AGGAGGCGGG ACTCGGCTCG CTCCCCGGCG GCGGGGCGGA AATCTTTGCT 
CCGGCCGTGC GCAACCGGCT CTGTCCCGAG AAGATCTCCG GCGACAAGTG GCTGGCCATC 
ATGGAGGAGG TCCACCGGGC CGGGCTCAAA TCCAATGCCA CCATGCTCTA CGGCCACATC 
GAGAGCTACG CGGACCGCGT GGACCACATG CGCCGCCTGC GTGAGCTTCA GGACCGCACC 
GGCGGCTTCC AGGTCTTCAT CCCCCTGGCC TTCCAGAAGG ATAACAACCC CCTGGGGCAC 
CTGAAACGCC CCGGGCCCGG TGGGGTCGAC GCCCTGCTCA CCCTGGCCGT GGCCCGCATC 
TACCTGGACA ATTTCGCCAA TATCAAAGCC TACTGGGTCA TGCTCGGGGT AAAGATCGCC 
CAGACTTCCC TGGCCTTCGG GGTAAACGAT CTGGACGGCA CGGTGGTGGA GGAGAAGATC 
GGCCATGATG CCGGCGCCGC TTCCCCCCAG ACCATGGGGC GCGACGAAAT CGTCTCCCTG 
ATCCGCACGG CCGGCCGGGT GCCGGTAGAG CGGGATACGC TGTACAACGA ACTGCGGGTG 
TACTGA 

 

Protein sequence

MSISLATISG RVHAGERISD EEALFLFESR DPLAVGELAA AVNRRRNGDR VFFNVNRHIN 
HTNICVNRCS FCAFYRAADE PGAYLYDLEE IRNRAAEAHA QGATEIHIVG GLHPDLPFDF 
YLAMLRTVKE VSPDLHVKAF TAVEIEYLSR LAGLSTAETL TVLKEAGLGS LPGGGAEIFA 
PAVRNRLCPE KISGDKWLAI MEEVHRAGLK SNATMLYGHI ESYADRVDHM RRLRELQDRT 
GGFQVFIPLA FQKDNNPLGH LKRPGPGGVD ALLTLAVARI YLDNFANIKA YWVMLGVKIA 
QTSLAFGVND LDGTVVEEKI GHDAGAASPQ TMGRDEIVSL IRTAGRVPVE RDTLYNELRV 
Y