Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0363 |
Symbol | dinG |
ID | 2686700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 394457 |
End bp | 396979 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637125028 |
Product | ATP-dependent helicase DinG |
Protein accession | NP_951422 |
Protein GI | 39995471 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.01237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGTT ACTTTTCGGA ACAGGCCATC CTCGACCTGC GCGCGGCCAT CGCCGACGCC GGGGGCAACG AGGTTTTCTT CCTGGGGCGC ACGGACGAGA ACCTCCTCGT GGTGGAGGTG GAGCCCCTTG CCCGAGGCAA CCGGGACGCC GTGGCCGCCA TCATGATTGC CACCAGCTTC GGCGACGTGG TGATCCACAA CCATCCATCC GGCGTCCTCA CCCCCTCCCA GGCCGACGTG GAGATCGCTT CGCTCCTGGG AAACCAGGGG GTGGGCTTCT CGATCATCGA CAACCGGGCC GAGAACTGCT ACCAGGTGGT TCCCCCCTTT GCCCGGCGGG AGACCCAGCG GCTGTCGTTC CCGGAGATCG AGCGGATCTT CGCGCCGGCC GGGGTGCTCA CCGACAATCT TCCCGGCTAC GAATACCGGG ACGAGCAGCT CAGGATGGCG TTCCGCGTCA CCGAGGCCTT CAACGACGAC CGGGTGGCGG TCATCGAGGC GGGCACAGGC ACAGGCAAGT CGCTGGCCTA CCTGGTCCCC GCCGTTCTCT GGGCCATCCG CAACCAAGAG CGGGTGGTGG TTTCCACCAA CACCATCAAT CTTCAGGAAC AGCTGACCCG CAAGGACATT CCCTTTCTCC AGCAGCACGC CGGCATATCC TTCAAGGCCG TGCTCGTGAA AGGGCGCTCC AACTACCTCT GCCGCCGCAA ACTGGCCGCC GTCAAGGCCG AGCCGTCGCT CTTCGCCGAT GACCCCGCCG CCGGCGAGCT GGAGGCCATC ATCGCCTGGA GCGAGACCAC TGGGGAAGGA TGCCGGAGTG ATCTCTCCTT CATTCCCAAG GAGGAGGCGT GGGAGGAGGT GGCCTGCGAG GCCGACCAGT GCGGCCGGGT CCGCTGCCCC TTCTACGCCC GCTGCTTCTT TTACTCCGCC CGACGCCAGG CTGCCAGCGC CGATCTTCTG GTGGTGAACC ACTCACTCCT CATGGCCGAT CTGGCCCTGC GCCAGGAGGC CGGCTACCGT TCCACCGCCA TCCTCCCCCC TTTCGAGCGG CTCATCGTGG ACGAGGGGCA CCATTTGGAG GACGTGGCCA CGGGACACCT GTCGGCCCAG GTCTCCCGCA CGGGGCTGTT AAAACTCATG GGAAGACTCC AGAACCCGCG CAAGCCACAG CGCGGGCTCC TGCCCCAGTT TTCAGCAGGG CTTGTCCGGG AGATGCCCGA AGCCCTCGAC GAACTCTACC GGGAACTGGC CGAACGGATC GATGGCACCC TCATCCCTCG CCGTCAGCAG TTGACCGACG GCGTCACTCG TGCCATGGAC GCCATCGGGA TCGCCCTCGT GGGTCACCTG TCGGAACGGG GGGGCACGAC GGGCGAACGG AAACTGCGGG TGACGCCGTC GCTCTTCGGC AGCCGACTCT GGCGAGTGGT GGACGACGAG GTGCGGGAAC TGGCCGCGGA TATGAACGAC TACGTGCGGG AACTGAAAGG AGTCCTCACG GCCTGCGTGC GTCTTCCTGA GGAGGTACGG GAAAAGCTTG CCGGGCTCCT CATCGACCTG CGGGGAATCA CCGGCAGGCT CGAAGCCGTG GCCGGCGACC TGATCTTCTT CATCGGCCGC GAGGGCGAGG TTTGCCGCTG GTTTGAGGTG AAACGGGGCA AGAATGGCAT GGTCGTACGG CTCTGCTCGT CTCCTCTGGA GGTGGCGGCA TCCCTCAAGC GGACTCTCTT CGACGCCTTC CGGACCGTGG TCGTCACCTC CGCCACGTTG GCGGTGGGAG AGCGGTTCGA CTACCTGGCC AGACGAACCG GCATCGCGCT CCTGAAACAG GATCGGGTCA CCGAACTCCT CCTGGCTTCC CCCTTCGACT ACGAGCACCA GGCCTTCGTG GGGATCCCCG CCGATATCCC GGAACCTGCC TCGCGCGGCT TCCAGGAAGC CCTGGAGCTG GCCCTTCACC AGGGACTGGC CATCTCGGAG GGGCACGCCT TTGTCCTCTT CACCTCCTAC GACCTGCTGG CAAAACTTTT CGGCAGGATG GCCGAGACAC TGAAACGGCG AGGCCTCACC CCGCTGCGCC AGGGAGAGGT CAACCGACAC CACCTCCTGG CCCGGTTCAG GCAGGAGCCC AACGCCGTGC TCTTCGGCAC CGACTCCTTC TGGGAAGGAG TTGACGTCCA GGGGAAGGCT CTGGAGCTGG TGGCGCTCAC ACGTCTCCCC TTCAGGGTCC CCACGGAACC GGTCCTGGAG GCCAGGGCCG AGCACATCGC CGCCGGTGGG GGCGACCCCT TCATGGAATA CACGGTTCCC CAGGCGGTCA TCAAGTTCAA ACAGGGATTC GGACGGCTGA TCAGAAGCAG AGAGGACCGG GGCGCGGTCC TCATCCTCGA CAGTCGGGTC CTGACAAAAA ACTACGGCGG GCATTTCCTC CGGTCACTGC CGCCCGTGCG GCTCGTGACC GGTTCTTCGG CGGAGGTCTT CGGGGCCATG GCTGACTTCT TCGCGGCCCC TCCATCCCCA TAG
|
Protein sequence | MKRYFSEQAI LDLRAAIADA GGNEVFFLGR TDENLLVVEV EPLARGNRDA VAAIMIATSF GDVVIHNHPS GVLTPSQADV EIASLLGNQG VGFSIIDNRA ENCYQVVPPF ARRETQRLSF PEIERIFAPA GVLTDNLPGY EYRDEQLRMA FRVTEAFNDD RVAVIEAGTG TGKSLAYLVP AVLWAIRNQE RVVVSTNTIN LQEQLTRKDI PFLQQHAGIS FKAVLVKGRS NYLCRRKLAA VKAEPSLFAD DPAAGELEAI IAWSETTGEG CRSDLSFIPK EEAWEEVACE ADQCGRVRCP FYARCFFYSA RRQAASADLL VVNHSLLMAD LALRQEAGYR STAILPPFER LIVDEGHHLE DVATGHLSAQ VSRTGLLKLM GRLQNPRKPQ RGLLPQFSAG LVREMPEALD ELYRELAERI DGTLIPRRQQ LTDGVTRAMD AIGIALVGHL SERGGTTGER KLRVTPSLFG SRLWRVVDDE VRELAADMND YVRELKGVLT ACVRLPEEVR EKLAGLLIDL RGITGRLEAV AGDLIFFIGR EGEVCRWFEV KRGKNGMVVR LCSSPLEVAA SLKRTLFDAF RTVVVTSATL AVGERFDYLA RRTGIALLKQ DRVTELLLAS PFDYEHQAFV GIPADIPEPA SRGFQEALEL ALHQGLAISE GHAFVLFTSY DLLAKLFGRM AETLKRRGLT PLRQGEVNRH HLLARFRQEP NAVLFGTDSF WEGVDVQGKA LELVALTRLP FRVPTEPVLE ARAEHIAAGG GDPFMEYTVP QAVIKFKQGF GRLIRSREDR GAVLILDSRV LTKNYGGHFL RSLPPVRLVT GSSAEVFGAM ADFFAAPPSP
|
| |