Gene Ssol_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2019 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1812405 
End bp1813397 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content37% 
IMG OID 
ProductDNA primase small subunit 
Protein accessionACX92227 
Protein GI261602624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.358314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGACTT TTACATTGCA CCAAGGGCAG ACTAATCTAA TAAAGAGTTT TTTTAGGAAC 
TACTATTTAA ATGCGGAATT GGAATTGCCA AAGGATATGG AATTAAGGGA GTTTGCTCTC
CAACCATTTG GCTCAGACAC CTACGTAAGG CATCTTTCCT TCTCTTCTAG CGAAGAATTA
AGGGACTACT TAGTTAACAG AAATTTACCA CTTCATTTAT TTTACTCTTC AGCTAGGTAT
CAGTTACCGA GCGCTAGAAA TATGGAGGAG AAAGCTTGGA TGGGGTCCGA TTTGTTATTT
GATATAGATG CTGATCACCT ATGCAAATTA AGGTCAATTA GGTTTTGTCC AGTTTGTGGT
AATGCCGTAG TTTCTGAGAA ATGTGAGAGA GATAACGTAG AGACTTTAGA GTATGTTGAG
ATGACTAGCG AGTGTATAAA AAGGGGTTTA GAACAGACTA GAAACTTGGT TGAAATTCTT
GAGGATGACT TCGGATTAAA ACCTAAGGTT TACTTTTCTG GAAATAGAGG TTTTCACGTA
CAAGTCGATT GTTATGGTAA TTGTGCATTA TTAGATTCTG ATGAAAGGAA AGAAATTGCC
GAGTACGTCA TGGGTATTGG TGTTCCAGGC TACCCTGGTG GTAGTGAAAA TGCTCCGGGA
TGGGTTGGAA GGAAAAATCG CGGTATAAAT GGGGTTACTA TTGATGAGCA AGTCACTATT
GATGTTAAGA GGCTAATTAG GATTCCAAAT TCTCTACATG GGAAATCTGG ATTAATTGTT
AAGAGAGTAC CTAATTTGGA TGATTTTGAA TTTAATGAGA CTTTATCTCC ATTTACGGGA
TATACGATAT TTTTGCCGTA TATTACTATA GAGACTGAGG TTTTAGGTAG TATCATTAAG
TTAAATAGGG GTATACCAAT TAAGATTAAA TCTAGTATTG GGATTTATCT TCATTTGAGA
AACTTGGGTG AGGTAAAGGC TTATGTTAGA TGA
 
Protein sequence
MGTFTLHQGQ TNLIKSFFRN YYLNAELELP KDMELREFAL QPFGSDTYVR HLSFSSSEEL 
RDYLVNRNLP LHLFYSSARY QLPSARNMEE KAWMGSDLLF DIDADHLCKL RSIRFCPVCG
NAVVSEKCER DNVETLEYVE MTSECIKRGL EQTRNLVEIL EDDFGLKPKV YFSGNRGFHV
QVDCYGNCAL LDSDERKEIA EYVMGIGVPG YPGGSENAPG WVGRKNRGIN GVTIDEQVTI
DVKRLIRIPN SLHGKSGLIV KRVPNLDDFE FNETLSPFTG YTIFLPYITI ETEVLGSIIK
LNRGIPIKIK SSIGIYLHLR NLGEVKAYVR