Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0083 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 85556 |
End bp | 86815 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | O-antigen polymerase |
Protein accession | ACX37781 |
Protein GI | 260447359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0973021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACAT CCTTTAAACT TCATTCATTG AAACCTTACA CTCTGAAATC ATCAATGATT TTAGAGATAA TAACTTATAT ATTATGTTTT TTTTCAATGA TAATTGCATT CGTCGATAAT ACTTTCAGCA TAAAAATATA TAATATCACT GCTATAGTTT GCTTATTGTC ACTAATTTTA CGTGGCAGAC AAGAAAATTA TAATATAAAA AACCTTATTC TTCCCCTTTC TATATTTTTA ATAGGCTTGC TTGATTTAAT TTGGTATTCT GCGTTTAAAG TAGATAATTC GCCATTTCGT GCTACTTACC ATAGTTATTT AAATACTGCC AAAATATTTA TATTTGGTTC TTTTATTGTT TTCTTGACAC TAACTAGCCA GCTAAAATCA AAAAAAGAGA GTGTATTATA CACTTTGTAT TCTCTGTCAT TTCTAATTGC TGGATATGCA ATGTATATTA ATAGCATTCA TGAAAATGAC CGCATTTCTT TTGGTGTAGG AACGGCAACA GGAGCAGCAT ATTCAACAAT GCTAATAGGG ATAGTTAGTG GCGTTGCGAT TCTTTATACT AAGAAAAATC ATCCTTTTTT ATTTTTATTA AATAGTTGCG CGGTACTTTA TGTTCTGGCG CTAACACAAA CCAGAGCAAC CCTACTCCTG TTCCCTATAA TTTGTGTTGC TGCATTAATA GCTTATTATA ATAAATCACC CAAGAAATTC ACTTCCTCTA TTGTTCTACT AATTGCTATA TTAGCTAGCA TTGTTATTAT ATTTAATAAA CCAATACAGA ATCGCTATAA TGAAGCATTA AATGACTTAA ACAGTTATAC CAATGCTAAT AGTGTTACTT CCCTAGGTGC AAGACTGGCA ATGTACGAAA TTGGTTTAAA TATATTCATA AAGTCACCTT TTTCATTTAG ATCAGCAGAG TCACGCGCTG AAAGTATGAA TTTGTTAGTT GCAGAACACA ATAGGCTAAG AGGGGCATTG GAGTTTTCTA ACGTACATCT ACATAATGAG ATAATTGAAG CAGGGTCACT GAAAGGTCTG ATGGGAATTT TTTCCACACT TTTCCTCTAT TTTTCACTAT TTTATATAGC ATATAAAAAA CGAGCTTTGG GTTTGTTGAT ATTAACGCTT GGCATTGTGG GGATTGGACT CAGTGATGTG ATCATATGGG CACGCAGCAT TCCAATTATC ATTATATCCG CTATAGTCCT CTTACTCGTC ATTAATAATC GTAACAATAC AATTAATTAA
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Protein sequence | MLTSFKLHSL KPYTLKSSMI LEIITYILCF FSMIIAFVDN TFSIKIYNIT AIVCLLSLIL RGRQENYNIK NLILPLSIFL IGLLDLIWYS AFKVDNSPFR ATYHSYLNTA KIFIFGSFIV FLTLTSQLKS KKESVLYTLY SLSFLIAGYA MYINSIHEND RISFGVGTAT GAAYSTMLIG IVSGVAILYT KKNHPFLFLL NSCAVLYVLA LTQTRATLLL FPIICVAALI AYYNKSPKKF TSSIVLLIAI LASIVIIFNK PIQNRYNEAL NDLNSYTNAN SVTSLGARLA MYEIGLNIFI KSPFSFRSAE SRAESMNLLV AEHNRLRGAL EFSNVHLHNE IIEAGSLKGL MGIFSTLFLY FSLFYIAYKK RALGLLILTL GIVGIGLSDV IIWARSIPII IISAIVLLLV INNRNNTIN
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