| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3399 |
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| Symbol | |
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| ID | 7970637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3579769 |
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| End bp | 3581262 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793983 |
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| Product | glycerol kinase |
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| Protein accession | YP_002945282 |
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| Protein GI | 239816372 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0554] Glycerol kinase |
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| TIGRFAM ID | [TIGR01311] glycerol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.9724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTACC TGCTCGCCCT CGACCAAGGC ACCTCCAGCT CCCGCAGCAT CGTGTTCGAC
CGCGAAGGCC GCATCGTCGC CATCGCGCAG AAGGAGCTCA CGCAAATCTA TCCGCGGCCC
GGCTGGGTCG AACACGACCC GATGGAGATC TGGCACAGCC AGCTTGCCAC CGCGCGCGAC
GTGCTCGCCA AGGCCAAGCT CCAGCCCGCG GACATCCACG CCATCGGCAT CACCAACCAG
CGCGAGACCA CCCTGCTGTG GAACCGCAAG ACCGGCCAGC CCGTGCACCA CGCCATCGTC
TGGCAGGACC GGCGCGCCGA GCCGATGTGC GCGCAGCTGC GCGACCAGGG CATGGCCGCC
ACCATCCAGG AGAAGACCGG GCTCGTCATC GACGCCTATT TTTCCGGCAC CAAGCTGCGC
TGGCTGCTCG ACAACGTGCC CGGCGCGCGC GCGCAGGCCG AGCGCGGCGA ACTCGCCTTC
GGCACCGTTG ACAGCTGGCT CATGTGGCAG CTCACCGGCG GCAAGGTGCA CGTGACCGAC
GTGAGCAACG CCTCGCGCAC CATGCTCTTC AACGTGCACC GCAACGAATG GGATGCCGAC
CTGCTCAAGG CGCTCGACAT TCCCGCGGCG CTCATGCCCA GCGTGCAGCC GTCGAGCTCG
CACTTTGCCG ACACCGACGC CGCCCTGCTC GGCCGCGCGC TCCCGATCGG CGGCGTGGCC
GGCGACCAGC AGAGCGCCCT CTTCGGCCAG GCCTGCTTTG CGGCCGGCAT GGCCAAGAAC
ACCTACGGCA CCGGCTGCTT CCTGCTGATG CACACCGGCG GCGAATGCCA GCCCTCGCAC
AACGGCCTGC TCGTGACCAG CGCCGCGCAG ACCAGCGCCA CGCCGCAGTA CGCGATGGAA
GGCAGCGTGT TCGTCGGCGG CGCCGTGGTG CAGTGGCTGC GCGACGGCCT GAAGGCCATC
AAGGGCAGCG CGGAAGTGCA GTCGCTCGCC GAAAGCGTGC CCGATGCGGG CGGCGTGATG
ATGGTGCCGG CCTTCACCGG CCTGGGCGCG CCCTACTGGG ACGCCGATGC GCGCGGCACC
ATCACCGGCC TCACGCGCGG GACCACGGTG GCACACATCG CGCGCGCCGC GCTCGAGAGC
ATCGCCTACC AGAGCGCCGC GCTGCTGCAG GCCATGAGCC GCGATGCGGT GGCGGCCGGC
GGCACGCCCG TCGCTGAACT GCGCGTGGAC GGCGGCGCGA GCGTGAACGA CCTGCTGATG
CAGTTCCAGG CCGACCTGCT GGGCATTCCC GTGGTGCGGC CCGAAGTGAT CGAGACCACC
GCGCTTGGCG CGGCGTACCT GGCGGGCCTG TCGACCGGCG TCTACAGCGA CGCGCGGCAG
CTGTCGAAGC TGTGGAAGGT GGAGCGGCGC TTCATGCCGA CCATGGGCCG CGCGCAGGCC
GAGGAATCGA TGGCGCGCTG GGAGCGCGCG GTGCGGCAGG CCACGGCGAC CTGA
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| Protein sequence | MTYLLALDQG TSSSRSIVFD REGRIVAIAQ KELTQIYPRP GWVEHDPMEI WHSQLATARD
VLAKAKLQPA DIHAIGITNQ RETTLLWNRK TGQPVHHAIV WQDRRAEPMC AQLRDQGMAA
TIQEKTGLVI DAYFSGTKLR WLLDNVPGAR AQAERGELAF GTVDSWLMWQ LTGGKVHVTD
VSNASRTMLF NVHRNEWDAD LLKALDIPAA LMPSVQPSSS HFADTDAALL GRALPIGGVA
GDQQSALFGQ ACFAAGMAKN TYGTGCFLLM HTGGECQPSH NGLLVTSAAQ TSATPQYAME
GSVFVGGAVV QWLRDGLKAI KGSAEVQSLA ESVPDAGGVM MVPAFTGLGA PYWDADARGT
ITGLTRGTTV AHIARAALES IAYQSAALLQ AMSRDAVAAG GTPVAELRVD GGASVNDLLM
QFQADLLGIP VVRPEVIETT ALGAAYLAGL STGVYSDARQ LSKLWKVERR FMPTMGRAQA
EESMARWERA VRQATAT
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