| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0959 |
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| Symbol | |
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| ID | 5661358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1171207 |
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| End bp | 1172937 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235505 |
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| Product | DNA primase |
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| Protein accession | YP_001500821 |
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| Protein GI | 157960787 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000094448 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATAC CTCGTGATTT TATTAATGAG CTAGTAGCTC GCACTGATAT TGTCGATTTA
ATCGACCCCA AAGTGCCCCT TAAAAAGGCG GGTAAAAACC ACTCTGCCTG TTGTCCTTTT
CATAGCGAAA AATCTCCCTC TTTCACCGTT AGCAGAGATA AACAGTTCTA TCATTGTTTT
GGCTGCGGCG CGCACGGCAA CGTCATCGAT TTTGTCATGG AATATGACCG ACTCGACTTT
GTTGATGCCA TTGAAGAACT CGCCGGACAA CTCGGATTAG AAGTCCCTAG GGAACAAGGC
ACAGGTAAAC CACGCGACCA AGAACTAAGC CGTGATTTAT ATCAGTTAAT GGAAGAAGCC
AGTAACTTCT TTCAAAATCA GCTAAGACAA AACACAGACA AACAAAAAGT CCTTGATTAC
CTTGATCATC GAGGCCTTAC AAAAGAAGTG GTTGAACACT TCAATATCGG TTTTGCTCCC
GATGGTTGGG ATGGCTTACT CAGCCGTTAC CGCCAAAATC AAGATTCGCA AGACAAGCTA
TTAACCGCAG GTATGGTCAT CGAGAATGAC AGCGGTAAGC GTTACGACCG ATTCCGTGAC
CGATTGATGT TCCCTATTAG AGATAGGCGC GGGCGAGTCA TCGGCTTCGG CGGCCGAGTT
TTAGGAGACG GTACCCCAAA GTACTTGAAT TCTCCAGAAA CGCCCATATT TCATAAGGGT
AATGAGCTCT ACGGCCTCTA TGAATTAAAG CAGCGGCACC GTGATCCACA AAGAGTCTTG
ATTGTTGAAG GCTATATGGA CGTTGTAGCT TTGGCACAAT TTGATGTTGA TTATGCGGTC
GCCTCCTTAG GCACCTCTAC AACAGCGGAT CAATTTCAGT TATTACTTCG CAGTGCAAAA
GAAGTCATCT GCTGCTACGA CGGCGATAAA GCCGGTAAAG AAGCCGCATG GCGAGCACTA
GAAACGGCCC TGCCGTTATT AAAGCCTGGT AATCAAGTTC GATTCATGTT CCTGCCTGAG
GGAGAAGATC CCGATACGCT GGTAAGACAG ATTGGCAAAG AGCAGTTTGA AGCCCAAATT
GACCAGGCAA TGGCACTACC CGAGTTTTTG TTCGAAAATC TGGCAAAAAC CTACGCCAAC
GAAGATAAGA GTGTTTTGGC AAAAAATGCC ATTAAACTTA TAGAGAAAGT GCAGGACACT
GTATTACAGA GCCTGTTACT CGAAGATTTA GCACATAAGC TAAGAATGAA TGGTGCAGAC
GAACTTAAGC GAAAATTTAA TTTTTCAGCT AAAGCGGCTG AAAAGCCTAG TCAGCACAAA
GCGTTGAAAG GGCGCGGTAC CCCATTGCGA TTAGCCATTG CATTGTTAGT ACAGCACCCA
CGCTTAGGTG AAAAACTACC TGAGCAACCA GCGCTAAAAC ATATACAGAT GGCCGGCATT
GACTTGCTGA CCCTTGTATT AGATTTAACT CGCGGACAAG TGATAAGCAG CGCACAACTA
CTTGAACAGT TCAGGGGCGA TAACCAATTC AGCACCCTAA AAAAACTGAC CCAATGGGAT
CATCAAGTGG CGGATGAAAA CTTGCTTCAA AAGTTAAAAG AAACACTCGT GTGGTTAAAC
AACCAGTATC TTGAGCAACG ATACCAAGAG CTGAGTATGA AGCAGAACCT CACGAAAGAA
GAGCGGTTAC AGCTTAGTAA GCTAATTTCA GTGATTAAAA ACAAGGCTTA G
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| Protein sequence | MAIPRDFINE LVARTDIVDL IDPKVPLKKA GKNHSACCPF HSEKSPSFTV SRDKQFYHCF
GCGAHGNVID FVMEYDRLDF VDAIEELAGQ LGLEVPREQG TGKPRDQELS RDLYQLMEEA
SNFFQNQLRQ NTDKQKVLDY LDHRGLTKEV VEHFNIGFAP DGWDGLLSRY RQNQDSQDKL
LTAGMVIEND SGKRYDRFRD RLMFPIRDRR GRVIGFGGRV LGDGTPKYLN SPETPIFHKG
NELYGLYELK QRHRDPQRVL IVEGYMDVVA LAQFDVDYAV ASLGTSTTAD QFQLLLRSAK
EVICCYDGDK AGKEAAWRAL ETALPLLKPG NQVRFMFLPE GEDPDTLVRQ IGKEQFEAQI
DQAMALPEFL FENLAKTYAN EDKSVLAKNA IKLIEKVQDT VLQSLLLEDL AHKLRMNGAD
ELKRKFNFSA KAAEKPSQHK ALKGRGTPLR LAIALLVQHP RLGEKLPEQP ALKHIQMAGI
DLLTLVLDLT RGQVISSAQL LEQFRGDNQF STLKKLTQWD HQVADENLLQ KLKETLVWLN
NQYLEQRYQE LSMKQNLTKE ERLQLSKLIS VIKNKA
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