| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2769 |
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| Symbol | |
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| ID | 4279675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3329800 |
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| End bp | 3330744 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135588 |
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| Product | porin |
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| Protein accession | YP_751448 |
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| Protein GI | 114563934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0218371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACG TTTTTTGTAA AACTCTATTA GCCTCTGCAA TGGCAGTCTC AGTAGCTTCA
AGTGCATACG CCGCAGATCC TCTTCAAGTT TACGGCAAGT TAAATGTAAC AGCACAATCA
AATGATGTTA ACGATGAAAC TGAAACGACT ATTCAAAGTA ATGCATCACG CTTTGGTGTG
ACTGGTGAGT TCGAATTAAG TCAGAAGCTT GAAGCTTTCT ACACTATCGA GTATGAAGTC
GATACCGGTG ACGATACTAA AGAAAACTTT AAAGCCCGTA ACCAGTTTGT TGGTTTAAAA
GGTAACTTTG GTGCCGTATC TGTTGGTCGT AACGACACGA TGTTAAAAGT TTCACAAGGT
AAAGTCGATC AGTTCAACGA CCTTGCTGGC GATATGAAGA CCATGTTTAA AGGTGAAAAC
CGCATGGCAC AAACTGCCAC TTACTACACG CCAATGTTTG GTGATTTCCA AGCAGGTGTG
ACTTATGTTG CATCTGGCGA TTCAGACCAA GTTGTTGGTG ACAACACTAC TGGTGAAGAT
GGTGTGAGTA TGGCTGTTAT GTACGGTGAT GCAGGCCTAA AAAGCACACC AATCTATGCA
GCGATTGCCT ATGATTCAAA AGTAAAAGGT TACGACACTG CTCGCGCCAC GGTTCAGGGC
AAAATAGCAG GTCTAGTCAT TGGCGGTATG TACCAGCAAC AAGAAAAACT AGACAGTGGT
ATCAAAGATG ATGGCTTCGT ATTAAGCACG GCTTATGGAA TCAATGATGT GACCTTAAAA
GCCCAATACC AAGACATGGA AAATAAAGGT AATTCATGGT CTGTCGGCGC TGATTACAAA
TTAGGTAAGC CTACTAAGTT GTTTGCTTTC TACACTGCCA ACTCATTTGA TTCAAATGAT
CAAGATGATA GTTATATCGG TGTAGGTTTA GAGCACAAAT TTTAA
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| Protein sequence | MMNVFCKTLL ASAMAVSVAS SAYAADPLQV YGKLNVTAQS NDVNDETETT IQSNASRFGV
TGEFELSQKL EAFYTIEYEV DTGDDTKENF KARNQFVGLK GNFGAVSVGR NDTMLKVSQG
KVDQFNDLAG DMKTMFKGEN RMAQTATYYT PMFGDFQAGV TYVASGDSDQ VVGDNTTGED
GVSMAVMYGD AGLKSTPIYA AIAYDSKVKG YDTARATVQG KIAGLVIGGM YQQQEKLDSG
IKDDGFVLST AYGINDVTLK AQYQDMENKG NSWSVGADYK LGKPTKLFAF YTANSFDSND
QDDSYIGVGL EHKF
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