| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3038 |
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| Symbol | |
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| ID | 8254150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3629560 |
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| End bp | 3630870 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644936687 |
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| Product | FeS assembly protein SufD |
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| Protein accession | YP_003093298 |
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| Protein GI | 255532926 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0292386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT TAACCTATTT CAAAGAACAA TTTAAACAGT CTCAGTCTGT AAATGCGGAT
GATAGCATTG CCGTTGTCAG AAAAAATAAT TTTGATGCTT TTAATAAAAT TGGCTTGCCT
ACATTTCATA CAGAGGAATG GAAGTATACC GGCATCAGCA ATCTTTTTGA CAGGGAATAT
AACCTTACAT CCGCTGTGTT GGAAAGCACT GTTACTGTTG CCGATGTAGA CGCTATTCGT
TTACCTGGCC ATAAAACAGC AAATGAACTG GTTTTTGTAA ACGGTCATTT TAATACGGCT
TTGTCCAATA TCCGTTCATC CGAGACAGAA TTGACTGTGC AGCCTTTAAC AGAGGCGGCC
CAGGGCACTT ATAAAACCAT AGTTGCTGCT CATTTAAATA AAAGCAGTAC TTATATAAAA
GACGGAGTTC ACGCCCTGAA TGGTGCTTTT ATAGCGGGTG GTGTTTTTGT ATACCTCCAT
AAAGGCAAAT TGCCTGAACA TCCGCTATAT ATATATCATA TTTTAGATGG AAGAGCAGAA
CATATCCTGG CCCAGCCACG TAGCCTTGTT TATGTGGATG AAAGCAGTAC GTTAAAACTA
ACAGAAGTAT ATGCTTCAGT AGGTACGTCC GATACTTTTT GTAACGAGGT AATGGAACTA
GTGGTGGAGA AAAATGCCTA TGTGGAATAT TATAAAATAC AGAATGATAG GGCAAATGCC
AGTCAGGTAA GCACTACGCA TATTACCCAG ATTGGACGAA GTTATGTACA TACAGTAACG
ATAACGCTTA GTGGTAACAT TGTACGCAAC AATATGAACC TGGTACTGGA TGCTCCGGGC
AATGAGGCGC ATTTATATGG TTTATACCTT TTAAAAGGAA AAACACATGC TGATAATCAT
ACGCTGATAG ACAACAGGCA AGCAAATTGC TTTAGCAATC AGTTTTATAA AGGGATTGCT
GCTGATTTTT CGACTGCTGT ATTTAATGGA AGGATCATGG TACAACCTGA TGCTCAGAAA
ACCAATGCCT ATCAGTCCAA TAAAAACATT CTGTTGTCCG ATAATGCTAC GATAAATACT
AAACCCCAGC TGGAAATTTT TGCTGATGAT GTAAAATGTT CGCATGGTTG TACAGTTGGG
CAGCTGGACG AAGAAGCCTT GTTTTATTTA AGGGCAAGAG GCATTCCCAA AGCAAAGGCC
GAAGTATTGC TTTTGCAGGC TTATGCAACA GACATACTAG ACCAGATCAA ATCCGAGCCT
TTACGTAAGT ATGTAGAAAA ACTAATTTAC AAACATTTAT CTCTTCAATA A
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| Protein sequence | MNDLTYFKEQ FKQSQSVNAD DSIAVVRKNN FDAFNKIGLP TFHTEEWKYT GISNLFDREY
NLTSAVLEST VTVADVDAIR LPGHKTANEL VFVNGHFNTA LSNIRSSETE LTVQPLTEAA
QGTYKTIVAA HLNKSSTYIK DGVHALNGAF IAGGVFVYLH KGKLPEHPLY IYHILDGRAE
HILAQPRSLV YVDESSTLKL TEVYASVGTS DTFCNEVMEL VVEKNAYVEY YKIQNDRANA
SQVSTTHITQ IGRSYVHTVT ITLSGNIVRN NMNLVLDAPG NEAHLYGLYL LKGKTHADNH
TLIDNRQANC FSNQFYKGIA ADFSTAVFNG RIMVQPDAQK TNAYQSNKNI LLSDNATINT
KPQLEIFADD VKCSHGCTVG QLDEEALFYL RARGIPKAKA EVLLLQAYAT DILDQIKSEP
LRKYVEKLIY KHLSLQ
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