Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0126 |
Symbol | |
ID | 3706158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 133209 |
End bp | 138485 |
Gene Length | 5277 bp |
Protein Length | 1758 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637736642 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_342189 |
Protein GI | 77163664 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAA ATTATGAGTT CAGTGAAAAC GCGCTCAGCT GGGTTAAGAA TGAGCTTGAA GAATCATTGC GTGAGGCAAG TCTAGCTTTA GAAGCCTTTG CCGAAAACAC AGATGATATC ACCCAATTAC GCTTCTACCT AAACCATTTA CATCAGGTAG AAGGAGTTCT TGAAATGGTG GAATTATCAG GGGCAAATCT GCTTGCGTCT GAGACCAAAG CGCTAGCTCT TGGTATTCTT GAGAAAGAAA TAGAATCTAA TTCTCAAGCT CTAGAAATAT TAATGCAAGG TACGCTTTCT CTTCAGGATT ATCTAAATCG CCTACATTCA GGAAAGAAGG ATCATCCTGT TAGTGTCTTG CCTATGGTAA ATGAGATACG TCAAACCTAT AACAAGTGCC CACTAAAAAA AATAGATTTC TTTGAGCCGG AATTAAACAC TCCGCTCCCA AACACCTTGG CATCTCCCTT AGAGATGGAT AGTAACGTTT CTCCCTTATT TTCTTCCAAA TTACGTCTTC AATACGAGTC GGCTCTCCTC AATTGGTTCC GAAATTCATC CAGTGATAGT CTTTTACACC TAGCTAAGGT CATGTCTGAA TTACGGCAAA GCTGCCGTGA TATTGCTGCT ATTCGCCTAT GGTGGTTATC TCAAGGAGTT ATTGAAGCGC TGCAAGAAGA TGGAATTCAA TCAACCCAAG AAATAAAACT TTTATTAGGA GGATTGAATA AGAAAGTTAA AATATTGATT CAATCAGGCG AGTCCGCATT AGTAGACGAT ATAACTGACA GCCTGCTTAA ATCACTATTA TTCCAAGTTG CTAATGCTAC CTCTTCTGGA AGCTATGTTT CTGCCATAAA AGAAACTTAT CAATTAGAAA ATTATTTTTC TTCTTCAGAC CAGTCCTTAT TAAGCAATCT AGGAGCCGAA GTCGTTGATA CGGTATTTGA TGCTCTTCAA GAAGATCTTA CTCAGGCTAA AGATCTCCTA GAGATTTCTG AACGCGCTAA TGGAATATCA AAGGAAGGAA TTGAAAATCT AGATCGCCTG TTTCACAAGA TGGCTGATAC CTTAGAAGTA CTTGGCTTTG ATACCTCTAT TTTCATTCTG CATGAAGCAA TCAGGAAGCT ACATGCTATT AGTCAAAAAG AAACTGGATC TGACAGCAAT CAACAGCTAG ATTTGGCTGA TAATCTGCTC CAAATTGAGG CATCACTTAA AAAAGAAATA GCGTTATCAA AAAACCCAAA AAAATCATCT CCTGCCACTG GTAGCCATTC CGATATTCGC CAAACGACAT CTTCAGCTCC TACTTCTGAT GATAATGTCA AAGCGGCGCT GCATACGGCA GCAAAAGAAT GCCTCGCTGA ACTTATGACT GTAAGTGAGG CACTAACTAG CTATAGTCTG AATCTAAACG ACTCAAACGC ACTGAATTCT GTTCCGAATA AATTACGACA AATCTCAGAG ATTTTGTCGG TGCTGGAATT AACCCGTATT GCCGATTTAA TCGCAGAGTG TAATATTTTC ATTAATAAAG CTCTTATCGG AAAAATATAT AAGTCCTACC CCGCCGGCCT GGAGGAACTA GCAGAAGCCA TTTGCGCTAT AGAACTCTAT CTAGAGATGC TAGCGGAAGG CGCGTTAGCG AGCAGCTCAC TTTTAGACAC TGCAGCGGAA TGCCTGACCC GTGTTCCAAC ACCTTTAGAT AATGCGATTA ATAATTACCA AGCTAATGTC GAATCTATGG GTGCTGAATC TGCCCCCGAA GAATTATCTT TAGGAGTTAC TGAAGAAAAC TCTGTCTCAG AAGTAAAAAG CGACCTAATT CCATTCTCTA GAACCACTTG GGAAATTCCT GGCGCACCAG TTTATCCAAA AGATGTCGAC CCAGAAATTG CCACCTATTT TATTGAAGAA GCCCAAGAAG AGATGCTTTC CATCGCTAAG CATTTTTCTC AATGGCGGCA GGATAGCAGC CAACAGGAAG CGCTTAAAAC GATACGCCGC TCCTTTCATA CCCTCAAAGG CAGTGGGCGC CTCGTCGGTG CAATCGATAT CGGCGAGCTA GCCTGGGCTA TTGAAAATAT GCTTAACCGT ATTATGGAGG GAACAATTGA AATCAAGCCT GCGGTATTTG AAATAATTGA AGGAGCACAG CAAGCATTAC CACAGCTTCT TACCTTGTTC ACGCAGGGGG GAGGGAGACC AGCCGAGAGT ATTTTGGCAT TATTACAAAG GGCGCAGGCC GTAGCTGACA ATACGCCCAA TCTTGCTTCC AGTGAGGTTG ACTCCACCCT CCAGGCTGTT GAAGTAGAGG ATTCCTACTC CCCCCCTGCT AAAAACAGCG AGTCCTCCAC CGGGGAGAAA AATTCTAAGC ATGATCCAGA ACTTACCCAG GAAGCACAGC TAGCAGAACA AGGAAAATTC ATTTCAGGCC AGCATACTTC TGTTTCTGGA CATCTTTCGG ATCCAGAATT ACTAGCCGTT TTCCTCGATG AAGCGGATGA CGTCCTGCAA GCTATAGAGA CTACGCTAAC CGACCTACGC GCATCTCCTC AAGAAAGCAC ACCGGTACAA CAACTACAAC GAGAGCTTCA TACCCTAAAA GGGGGCGCAC GCCTGGCTAA CCTTACCGCT CTGGGCGATC TTAGCCATGA TCTGGAATCT CTTATTATCA CTGCTATTGA TAAGGGCTTT ACAGATAACA GTGAATTCCT CAATCTCTTA CAAGAAGGAC ATGATCGACT TGCAGAAATG TGCGACTCCC TTCGCCATGG AGCTGCTTTA CTCGCTGCTA ATGATTTATC CTCCCGTATT CATGGAATGG CTGAATCTTT ACCATATACG GAAAAAATGC TGCCGATGCC AGATGAGCTC TCTCAGGATG ATACCCCTGA TCCTGTTTCA AAGGCTCCCT CCATCGATCC CAATAACGAA CTGGTTGCTG CTTTCCTAGA GGAAGCCGAT GAGCTGCTGC AGGCTAGCCA GATAAGCCTT TCAGCCTGGC AGAAAAACTT CTCCTCAGAA CAAGCTCCGG CTGAGGAATT TCAACGGCAT CTGCATACCT TAAAAGGTGG CGCGCGGCTA GCAGGGATTA CCCTGTTGGC TGACCTAGCC CATCATATGG AAACAATAGC AAGCACGATA ATAGAGGGAA AACAAAATAC GGAATCAGGG CTATTTGGGC TTTTGCAGCA TTGTCTTGAT AGATTATGTA CATTATGCGA GTTTGCTCAA AACGCTGTCC CACTCCCTTC CATATCAGAT TTATTGATTG AAATAAGTCG TTACAATTCT GAGGATCTAC CATCCTCTCA GAAATCGGAA CAAGCGCGGT TAATTCACGA TCAAGAACTG CCAGCAGCAA CACTAGCTCT TCCCCCCGAA CAGAAGCTGC ATAAAACCGC GCGCCCTCTT GCAGAAACCG GAACCCCTCC AGTAGAACAA ATACGGGTAC GGGCCGATTT GCTGGATCAT CTAGTGAACA ATGCTGCTGA AGTTAATATC TTTAGCACTC GCCTCGAACA ACAGATTGGG ACAATACGTT TAAACCTTGG CGAAATGGAA CGAACTGTTG CCCGCCTGCG GAGTCAAATT CGCAGGTTAG AGATCGAGAC AGAGACCCAA ATCATTTATC GCCATGAAGA AGCAAATAAC CAACATCTGG AAGGCTTTGA TCCCTTGGAA ATGGATCGCT ACTCTCAATT ACACCAATTG TCACGGGGAC TCGTGGAAAG TATCAGCGAT CTCACTAATA TTAAAGAAAC GCTAGATGGG ACAGCACGGG AAGCGGATAT CCTCTTACTC CAGCAATCAC GTACTGGGGC TGACCTGCAA CAGGGCTTAA TGAATACACG GATGCTACCG TTTACGGGAG TAACACCGCG CCTTCATAGA ATCGTTCGCC AAACAGCCCA GGAACTCGAT AAAAAAGTCC AGATAAAAAT AACGGATAGC GGTCATGAAT TAGACCGTAC AGTATTAAAT CGTATTATGG CTCCCCTTGA GCATATGTTA CGAAATAGTA TCGCTCATGG TATTGAAAAA GCCCCTCTCC GTATTGCAGC TGGCAAGAAA GAAATGGGTA GTATTTCCCT CTCACTAACC CGTGAAGGCT CGGAGATTGT CATCCACGTA AGCGATGACG GACAAGGCAT TGATTTGGAG AAAATACGCG CTAAAGCACT TACTCGAGGA TTGGTGCAGA AAGAGGCGAT GCCGCCCGAC GCTGATCTAA TCCAGCTCAT CCTGGAATCG GGTTTCAGTA CTGCTAATAA CGTTTCCCAA GTTGCGGGGC GTGGGATAGG TATGGATGTT GTCAATAGCG AAATACAAGC CCTCAACGGA ACCTTAGCTA TCGCCTCTCA AAAAGGTAAG GGAACAACCT TTACCATCCG CCTTCCACTG ACTTTTACTA TTGTCCAGGC CCTGTTAGTC GAAACGAAGA ATGAACTTTT CGCTTTGCCT ATCATTAGCG TACAAAGTGT AATCCGTCTT GATAAGGAAA CCGTTGATTC CCTCCTTGCT AGCGAACAAT GCCTATTTTG TCATGAAAAC GTTAATTATC GCTTTATTGA TCTTGGCGCC GCCTTGGGAC AAGATTACCC AGAAACATCC ACCTCTAACA CCCATTACCC TGTATTATTA GTGCGTTCGG GCGAATTTCA GGCCGCCATA CTAGTAGATG CTTTAATAGG CAGCCGTGAA ATCGTCATTA AATCAGTGGG ACCCCAGCTC GGCGCTATCA AAGAGATAGC CGGCGCAACT ATTCTAGGGG ATGGCAGAGT AGTGCTTATC CTGGATCTGC CAGCACTGAT CCGTAAGGCC ACACAAAAAA CAGAAACCTC TATAGCGATA AAGCGGCAGG CAAATACCAA GATAGCGCAA AAACCAGCGG TCATGGTCAT CGATGATTCT ATTACTATTC GCAAAACTAC CGAGAAAATT CTGGAACGCC ATGGAATGGA AGTACTGACA GCCCGGGATG GGGTAAATGC AGTAGAACTG CTTCAGGAAT ACACCCCCGA TATTTTCCTG CTAGATATTG AAATGCCGCG GATGGATGGC TTTGAGCTCG CTGCTTTTAT ACGAAAAGAT AAACGATTGC GGGGTATTCC AATCATCATG ATTACCTCCC GGAGCGGGAA AAAACACCGG GATAAAGCTG ACCAAATAGG CATTAACGCC TATTTAATTA AACCCTATCA AGAGGACGAA TTATTACAAC ATATTCAACT TTTTTTAAAC GCGACTGAGG CCAATGTTAC CCTCTAA
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Protein sequence | MSTNYEFSEN ALSWVKNELE ESLREASLAL EAFAENTDDI TQLRFYLNHL HQVEGVLEMV ELSGANLLAS ETKALALGIL EKEIESNSQA LEILMQGTLS LQDYLNRLHS GKKDHPVSVL PMVNEIRQTY NKCPLKKIDF FEPELNTPLP NTLASPLEMD SNVSPLFSSK LRLQYESALL NWFRNSSSDS LLHLAKVMSE LRQSCRDIAA IRLWWLSQGV IEALQEDGIQ STQEIKLLLG GLNKKVKILI QSGESALVDD ITDSLLKSLL FQVANATSSG SYVSAIKETY QLENYFSSSD QSLLSNLGAE VVDTVFDALQ EDLTQAKDLL EISERANGIS KEGIENLDRL FHKMADTLEV LGFDTSIFIL HEAIRKLHAI SQKETGSDSN QQLDLADNLL QIEASLKKEI ALSKNPKKSS PATGSHSDIR QTTSSAPTSD DNVKAALHTA AKECLAELMT VSEALTSYSL NLNDSNALNS VPNKLRQISE ILSVLELTRI ADLIAECNIF INKALIGKIY KSYPAGLEEL AEAICAIELY LEMLAEGALA SSSLLDTAAE CLTRVPTPLD NAINNYQANV ESMGAESAPE ELSLGVTEEN SVSEVKSDLI PFSRTTWEIP GAPVYPKDVD PEIATYFIEE AQEEMLSIAK HFSQWRQDSS QQEALKTIRR SFHTLKGSGR LVGAIDIGEL AWAIENMLNR IMEGTIEIKP AVFEIIEGAQ QALPQLLTLF TQGGGRPAES ILALLQRAQA VADNTPNLAS SEVDSTLQAV EVEDSYSPPA KNSESSTGEK NSKHDPELTQ EAQLAEQGKF ISGQHTSVSG HLSDPELLAV FLDEADDVLQ AIETTLTDLR ASPQESTPVQ QLQRELHTLK GGARLANLTA LGDLSHDLES LIITAIDKGF TDNSEFLNLL QEGHDRLAEM CDSLRHGAAL LAANDLSSRI HGMAESLPYT EKMLPMPDEL SQDDTPDPVS KAPSIDPNNE LVAAFLEEAD ELLQASQISL SAWQKNFSSE QAPAEEFQRH LHTLKGGARL AGITLLADLA HHMETIASTI IEGKQNTESG LFGLLQHCLD RLCTLCEFAQ NAVPLPSISD LLIEISRYNS EDLPSSQKSE QARLIHDQEL PAATLALPPE QKLHKTARPL AETGTPPVEQ IRVRADLLDH LVNNAAEVNI FSTRLEQQIG TIRLNLGEME RTVARLRSQI RRLEIETETQ IIYRHEEANN QHLEGFDPLE MDRYSQLHQL SRGLVESISD LTNIKETLDG TAREADILLL QQSRTGADLQ QGLMNTRMLP FTGVTPRLHR IVRQTAQELD KKVQIKITDS GHELDRTVLN RIMAPLEHML RNSIAHGIEK APLRIAAGKK EMGSISLSLT REGSEIVIHV SDDGQGIDLE KIRAKALTRG LVQKEAMPPD ADLIQLILES GFSTANNVSQ VAGRGIGMDV VNSEIQALNG TLAIASQKGK GTTFTIRLPL TFTIVQALLV ETKNELFALP IISVQSVIRL DKETVDSLLA SEQCLFCHEN VNYRFIDLGA ALGQDYPETS TSNTHYPVLL VRSGEFQAAI LVDALIGSRE IVIKSVGPQL GAIKEIAGAT ILGDGRVVLI LDLPALIRKA TQKTETSIAI KRQANTKIAQ KPAVMVIDDS ITIRKTTEKI LERHGMEVLT ARDGVNAVEL LQEYTPDIFL LDIEMPRMDG FELAAFIRKD KRLRGIPIIM ITSRSGKKHR DKADQIGINA YLIKPYQEDE LLQHIQLFLN ATEANVTL
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