| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2243 |
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| Symbol | thrS |
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| ID | 6878235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2215137 |
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| End bp | 2217071 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642790102 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_002220653 |
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| Protein GI | 198284332 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00594301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00373508 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGATA TCCAGTTGCC GGACGGTAGT CATCGTCAGT TTGCGGAGCC CGTGACCGGG
CTGACGCTGG CGCGAGCGAT CGGCAGCGGC CTCGCTAGGG CGGCGGTAGC CATGCGGGTC
GACGGCATCC TCAAGGATCT TTCGGCGGTG CTGGATCAGG ATGCGGAAGT GGCGATTGTC
ACCCGCGACA GCGCAGATGG TCTGGAGGTG ATCCGCCATT CCACCGCGCA TTTGCTGGCG
CAGGCGGTGC AGTCCCTCTA TCCGGAGGCT CAGGTCACCA TCGGGCCGGT CATCGATAAC
GGTTTCTACT ATGACTTTGC TTTTCCGCGT GGCTTCACGC CAGAAGATCT GGAAGCGATC
GAAGCGCGGA TGCACGCACT GGTCAAAGAA AATCTTCCGG TGCAACGCGA GATGCTCTCC
CGCGAAGATG CCATCGCTCT GTTTGAAAAG ATGGGCGAAG ACTACAAGGT CGAAATTATC
CGCGCCATTC CCCGAGGTGA ACCACTGAGC CTGTATCGGC AGGGGGATTT CGTGGACCTG
TGCCGCGGTC CCCATGTGCC ATCGACTGGC GTTCTCGGGG CATTCAAATT GCAGCGAGTG
GCGGGCGCCT ATTGGCGCGG GGATTCCCGC AATCCCATGT TGCAGCGTAT TTATGGCACG
GCCTGGGCGC AGCAGAAAGA CCTTGACGCC TATCTCCAGC AACTGGCGGA GGCCGAAAAG
CGGGATCACC GGCGTATCGG CACTGAACTG GAGCTCTTCT CCATTCAGGA AGATGCCGGT
GGCGGCCTGG TGTTCTGGCA TCCCATGGGC TCGCGCGTGC GACGCGTCAT CGAGGATTTT
TGGAAGGAGG CCCACGTGGA GGCAGGTTAC GATCTGCTCT ATACGCCGCA TATTGCCCAT
GAGCAGCTGT GGTATACCTC GGGGCACAAG GATTTCTACA GTGAGTCCAT GTTCGACCCG
ATGCAGGACG AGGGGCAGGC CTACCAGCTC AAACCCATGA ACTGTCCATT CCATATTCTC
ATTTATAAGG ACAAGCTGCA TTCCTACCGG GACCTGCCGA TTCGCTGGGC GGAACTGGGT
ACGGTTTACC GCCACGAAAT GTCGGGTGCC CTGCACGGAC TGATGCGGGT GCGGGGCTTT
ACCCAGGATG ATGCCCACGT CTTTTGTCGA CCCGACCAGA TAGAGGCAGA AATCGGTGCG
GTGCTGGTAC TGGTGCGAAA AATTCTCGGC ACCTTCGGCT TCGACCAGTA TGAAATCAAT
CTGTCCACCC GTCCCGGGCA TTCGGTGGGC AGTGACGAGA TCTGGGATGC CGCCACCCAG
GCCCTGCGCA ATGCCCTGGA GCGTGCGGGC CTGGAATATC AGGTGGATGC AGGTGGTGGC
GCGTTCTACG GACCTAAAAT CGATCTGAAG ATTCAGGACG CCATCGGTCG TAAGTGGCAA
TGCAGCACCG TGCAGCTCGA CTTCAATCTG CCGGAGCGCT TCGCCATGGA ATATGTGGCG
GAAGACGGTG CGCGCAAGGT GCCCATCATG GTGCATCGCG CCATCTTCGG TTCCATCGAA
CGCTTCTTCG GTGTACTCAT CGAGCACTAT GAGGGCAAGT TTCCAGTCTG GCTCGCTCCG
GTACAGGCCG TGGTGCTGCC TATCAGCGAG CATTACTCGG AATACGCCGA GTCGGTAAGT
GACGTATTGG TGAAACGCGG CATTCGGGCA GAAACGGACT TGAGAAACGA GAAGATAGGT
TATAAGATAC GCGCCCATAC TTTGCGTAGG GTGCCCTACC TGCTGGTGGT CGGGGAACGG
GAAAAAGAAG CGGGTACGGT GGCGGTGCGG GATCGAAATG GCCAGGATCT CGGCACGCTT
TCCATAGACG CCGTGGGCGC TACCCTGCAG AAAATGGACC AGGCGCGGGT GAATACCCTG
GAGTGGCAAG GCTAG
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| Protein sequence | MPDIQLPDGS HRQFAEPVTG LTLARAIGSG LARAAVAMRV DGILKDLSAV LDQDAEVAIV
TRDSADGLEV IRHSTAHLLA QAVQSLYPEA QVTIGPVIDN GFYYDFAFPR GFTPEDLEAI
EARMHALVKE NLPVQREMLS REDAIALFEK MGEDYKVEII RAIPRGEPLS LYRQGDFVDL
CRGPHVPSTG VLGAFKLQRV AGAYWRGDSR NPMLQRIYGT AWAQQKDLDA YLQQLAEAEK
RDHRRIGTEL ELFSIQEDAG GGLVFWHPMG SRVRRVIEDF WKEAHVEAGY DLLYTPHIAH
EQLWYTSGHK DFYSESMFDP MQDEGQAYQL KPMNCPFHIL IYKDKLHSYR DLPIRWAELG
TVYRHEMSGA LHGLMRVRGF TQDDAHVFCR PDQIEAEIGA VLVLVRKILG TFGFDQYEIN
LSTRPGHSVG SDEIWDAATQ ALRNALERAG LEYQVDAGGG AFYGPKIDLK IQDAIGRKWQ
CSTVQLDFNL PERFAMEYVA EDGARKVPIM VHRAIFGSIE RFFGVLIEHY EGKFPVWLAP
VQAVVLPISE HYSEYAESVS DVLVKRGIRA ETDLRNEKIG YKIRAHTLRR VPYLLVVGER
EKEAGTVAVR DRNGQDLGTL SIDAVGATLQ KMDQARVNTL EWQG
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