Gene Ava_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3641 
Symbol 
ID3679236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4540470 
End bp4541072 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content36% 
IMG OID637718992 
ProductTetR family transcriptional regulator 
Protein accessionYP_324142 
Protein GI75909846 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.798229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGA TTGTTGACCA TGACCAATAT CGGAAAGAAC TGCTCAGTAA ATGCTTTGAT 
TTATTTGCTG AAAAAGGCTA CGGTTCCATC ACCATGCGGC AAATTGCTCA AGGTTTAAAT
GTTTCTACAG GTACGCTGTA CCATTACTTT CCCAGTAAAC AAACGTTATT TGAGCAATTA
GTAGAAGAAA TAAGTCAACA AGATGTGAGT GCAGCATTAG CTGAGATGGA TGGAAGCAAA
ACGATAGAAG AGGCGATGAC AGCCTTAGGT CGATATTTGA TTAAGCATGA AGATTACTGC
ATTAAATGGA CGTATGTTTG GGTGGATTTT TGCCAAAGTC AAGATGTAGA GGAAGTACAG
AAAAATATTG TATTCAAACG TGTTAATCAA CGCTATCAGC AAGCTGTTTG TGATTTTTTA
GGCATTCAAG ATCCAGCGAT AGCAACCTTT GTTTTGAGCT TGATTAATGG CTTGATTTTG
GAAAAACTCT GGTGCAACCA GACAATTAAT TTTCAAGAAC AATGTACTTT GTTAGGAAAA
ATGTTGACAC TTTATTTAAA AAATAATCCA ACAAATCAAG TGGCTAATTA TCATCTTAAT
TGA
 
Protein sequence
MPKIVDHDQY RKELLSKCFD LFAEKGYGSI TMRQIAQGLN VSTGTLYHYF PSKQTLFEQL 
VEEISQQDVS AALAEMDGSK TIEEAMTALG RYLIKHEDYC IKWTYVWVDF CQSQDVEEVQ
KNIVFKRVNQ RYQQAVCDFL GIQDPAIATF VLSLINGLIL EKLWCNQTIN FQEQCTLLGK
MLTLYLKNNP TNQVANYHLN