Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0145 |
Symbol | |
ID | 9154279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 150242 |
End bp | 151177 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Prephenate dehydratase |
Protein accession | YP_003645138 |
Protein GI | 296137895 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCGCA TCGCCTATTT CGGCCCCGAG GGGACGTTCA CCGAGATGGC GCTGCTGCAG TGCCTCGACC TCGCCGCGCA GGGCCGGATG GATGTCCCGG GAGTCCCGCT CGCCGGCGCC GAGCGAGTCA GCGCGCCCAG TCAGGTGGCA GCGCTCGGCC TGGTCGCCGA CGGTGTGGTC GATCTCGCCT GTGTCCCCAT CGAATCCTCG GTCGAAGGGC CTGTCACCCC CACCCTGGAC ACGCTGGGAT TCGGCGGCGA TCCGCTGCAG ATCTACGCCG AGACCGATCT CGCCGTGTCC TTCTCCATCG TCGGTACCGT TCCGCTGGCC GAGGCGCGCA CCGTCGGCGC CTACCCGGTG GCCTCCGCAC AGGTCCGCGG CTGGCTCGCG GCGAATGCGC CGCAGGCCGA CGTCGTGCCC GCCGCCTCGA ACTCCGCCGC TGCGGTCGAC GCCGCGCAAG GCCGCGTCGA CGTCGCCGTC ACCACCGCAC TCGCGGCCGC GATGCACGGC GTCCCCGAGC TGGCCGCGGG CGTCGCCGAT GTGGCCGACG CCCGTACCCG ATTCGTGCTG TGCGGTCGCC CCGGCCCCGC GCCCGCCCGC ACCGGTCAAG ACTGCACGGC TGTCGTCCTC GACGTGCCGA GCCGGCCCGG CTCGCTGGCC CTCGTCATGG CCGAATTCGC GCTCCGCGGA GTCGATCTCA CCCGGATCGA GTCGCGCCCC AAACGGACCG TCTTCGGCAG TTACGTCTTC CATTTCGATT GTGTGGGCCA CATCGACGAC CCTGCTGTCG GCGAGGCATT GCGCGCCCTG CACCGGGTGT GCGACGACGT ACGCTTCCTC GGCTCCTGGC CCCGGCCCGG CGGCCCCGGC ACGGCTCCCA CCGACCCCGG TGACTCCGCC GAATGGTTCG ACCGACTGCG CAGGGGAGAA CGATGA
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Protein sequence | MTRIAYFGPE GTFTEMALLQ CLDLAAQGRM DVPGVPLAGA ERVSAPSQVA ALGLVADGVV DLACVPIESS VEGPVTPTLD TLGFGGDPLQ IYAETDLAVS FSIVGTVPLA EARTVGAYPV ASAQVRGWLA ANAPQADVVP AASNSAAAVD AAQGRVDVAV TTALAAAMHG VPELAAGVAD VADARTRFVL CGRPGPAPAR TGQDCTAVVL DVPSRPGSLA LVMAEFALRG VDLTRIESRP KRTVFGSYVF HFDCVGHIDD PAVGEALRAL HRVCDDVRFL GSWPRPGGPG TAPTDPGDSA EWFDRLRRGE R
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