Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0666 |
Symbol | |
ID | 4077274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 712251 |
End bp | 713177 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005963 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_612661 |
Protein GI | 99080507 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.829817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCATT TCCTCGATAT CCATAAAACC GCACCCGAAG ATCTGCGTCA GATCATTGAT CAGGCCGGGC AAATGAAAAC CGCACGTCTT GGCCGCCCCA AAGGCACGCC AGATGACGAG CAGCCGCTTG CAGGGCATAT GGTTGCGCTG ATCTTTGAAA AGCCCTCGAC CCGGACGCGG GTTTCTTTTG ATGTCGGGGT GCGCCAGATG GGCGGCGAAA CCATGGTGCT CTCCGGCAAG GACATGCAGC TTGGTCACGG CGAGACCATC GCTGACACCG CGCGGGTGCT GTCGCGCTAT GTGGACATGA TCATGATCCG GACTTTCGAC GAAACCGTGC TTACCGAGAT GGCAGAATAT GCCGATGTGC CGGTGATCAA CGGTCTTACC GACCGCACCC ACCCCTGTCA GATCATGGCC GATATCCTCA CCTATGAAGA ACACCGCGGC CCCATCAAGG GCAAGAAGGT GGTCTGGACC GGGGACGGAA ACAATGTTTG CGCGTCTTTT CTCCACGCGG CGGGTCAGTT CGGCTTCGAC CTTACCTTTA CTGGTCCGGC GCAGCTTGAC CCGGAAGATG AATTCATCGG GTTTGCGCGC AACGCGGGCT CCAAGATCAC TATCGAGCGG GATGCGGCGA AGGCCGTTGA GGGCGCGGAT CTGGTGGTGG CCGACACTTG GGTGTCGATG CATGACAGCC AATCCTCGAA GGAGCGGCGC CACAACATGC TGCGTCCCTA TCAGGTCAAC GACGCGTTGA TGGCGCATGC CAAGCCGGAC GCGCTCTTTA TGCATTGCCT GCCAGCGCAC CGCGAGGAAG AGGTGACCTC GGCAGTGATG GATGGCCCCC AGTCGGTGAT TTTTGACGAA GCCGAAAATC GCCTGCACGC GCAAAAGGCG GTCATGCGCT GGTGTCTGGG CGTCTGA
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Protein sequence | MNHFLDIHKT APEDLRQIID QAGQMKTARL GRPKGTPDDE QPLAGHMVAL IFEKPSTRTR VSFDVGVRQM GGETMVLSGK DMQLGHGETI ADTARVLSRY VDMIMIRTFD ETVLTEMAEY ADVPVINGLT DRTHPCQIMA DILTYEEHRG PIKGKKVVWT GDGNNVCASF LHAAGQFGFD LTFTGPAQLD PEDEFIGFAR NAGSKITIER DAAKAVEGAD LVVADTWVSM HDSQSSKERR HNMLRPYQVN DALMAHAKPD ALFMHCLPAH REEEVTSAVM DGPQSVIFDE AENRLHAQKA VMRWCLGV
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