Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3899 |
Symbol | |
ID | 4457754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4749951 |
End bp | 4751363 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639704672 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_848003 |
Protein GI | 116751316 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.173674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGCCA CAGATCTCCC CTATGGCCCC ATAACGCCCG AAATCATCGA TCTCATCCGC AAGGCGGCCG GGAGCGATGC GCTGGTCGTC GACCCTGAAA AACTGAAGGA TTTCGGCAGT GATGCGACGG ATTACCGCCG CATCCCGGAA CTGGTGGTCG AAGCCACGAC CGACCGGCAG GTCCAGGCCG TCATGCGCCT TGCCTCGGAA CACCGGTTTC CGGTCACGCC GCGGGGGCTC GGCACCGGGC TGGCCGGGGG CGCCGTGGCT CTCCGGGGAG GCGTCATTCT GTCCCTTGCC AGGATGAACC GCATCCTTTC CATCGACCGC GAAAATCTCA TCGCAACCGT CGAGCCGGGC GTGGTCACCA TGGATTTGAA GAAGGCCGCG ATCGCCCGGG GCCTCTGCTA TCCGCCGGAC CCGGCCAGCC TCGACACCTG CTCCATCGGG GGCAATGCCG GGACCAATGC CGGCGGCCCA TCCTGCATCA AGTACGGAAC CACTCGCGAT TACGTGCTCG GCCTCGAAGC CGTGCTCGCG TCGGGAGAGA AGATCCGCGC GGGCGTTCAA ACCCGCAAGG GAGTGGTAGG ATACGACTTG GCCCACCTGC TCGTGGGATC GGAGGGCACC CTGGGGATCA TCACCCGCCT GTACTTGAAG CTCATTCCAA ATCCTCCGGC CATCACCACC CTCGTTGCCC TCTTCCCGGA ACTTTCCGGA GCGATGCACG CCGTCTCCAC CGTGCTCGCA TCCGGCTACG TTCCGTGCGC GATGGAATTC CTGGATCGGC ACTGCATCGA GCTGGTCGGG GATTTGCTTC CTTTCGAGGG AGTGCGTGAG GCCGGAGCTT TCCTGCTGGT GGAAATGGAC GGAGCGCCCG GCGTGATCGC CCGCGAAATC GAGGAAGTCG GGGGAATCTG CATGGAGTGC GGGGCGGCCG ACGCCCTGCT CGCTCCCGAT TCGCAGAAAC GCGCGCAGAT GTGGGAGGTG CGCAAGCAGG TGTCGCTGCG CATCGAGCAC AATTCCCCCC TCTACATCCC CGAGGACGTG GTCGTGCCCA TCGGCCGCAT CGCGGAATTC GTGGAGGGGC TGCCCGAGAT CGAGCGGCTG TACGGCATGA AAATCTATTC CTTCGGTCAC GCGGGAGACG GCAACATTCA CCTGAACATC ACCGCGGATA CGCGCGACCG CGCGCAACGG GTGGAGGAAG GAATACGCGC CGCGCTGGAG AGGGTCCTGT CGATGGGGGG AACGATCTCC GGCGAACACG GGATCGGCAT CGCCAAGATG CGTTTTCTTC CGATGGAGCT CTCCCCCGAG AGCATCCGGA TTCAGGAGGG GATCAAGAAG GTGTTCGATC CCCTGATGAT CCTGAATCCG GGAAAAATAT TTCCTCAGGA GCGTGAAACG TGA
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Protein sequence | MNATDLPYGP ITPEIIDLIR KAAGSDALVV DPEKLKDFGS DATDYRRIPE LVVEATTDRQ VQAVMRLASE HRFPVTPRGL GTGLAGGAVA LRGGVILSLA RMNRILSIDR ENLIATVEPG VVTMDLKKAA IARGLCYPPD PASLDTCSIG GNAGTNAGGP SCIKYGTTRD YVLGLEAVLA SGEKIRAGVQ TRKGVVGYDL AHLLVGSEGT LGIITRLYLK LIPNPPAITT LVALFPELSG AMHAVSTVLA SGYVPCAMEF LDRHCIELVG DLLPFEGVRE AGAFLLVEMD GAPGVIAREI EEVGGICMEC GAADALLAPD SQKRAQMWEV RKQVSLRIEH NSPLYIPEDV VVPIGRIAEF VEGLPEIERL YGMKIYSFGH AGDGNIHLNI TADTRDRAQR VEEGIRAALE RVLSMGGTIS GEHGIGIAKM RFLPMELSPE SIRIQEGIKK VFDPLMILNP GKIFPQERET
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