Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0696 |
Symbol | |
ID | 5188645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 763929 |
End bp | 765116 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590530 |
Product | NusA antitermination factor |
Protein accession | YP_001271298 |
Protein GI | 148543928 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000696258 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTAAGC CAAAAATTAA CACTGAGATG ATTGGCGCCC TTGATTATCT TGAAAAAGAA AAGGGTATCA AGAAAGAGAT TGTTATTGAA GCGTTAGAAC AAGCACTTGA ATCAGCATAC AAGCAAAATT ACGGTGATAA GAATGTTGAA GTAGAATTCA ATTCATTGAC TGGGAATATT AAAGTCTACG CTGTAAAAAC AATTACTGAT GATGAAGAAG CAGTCGAAGC AGATAGCAAC GAATTTATGA GTTTAGCTGA TGCACGGAAG CTTCCTCATG GCCAAGGGTA TGATATTGGT GATGAAATTC GCGAAGAAGT TACTCCTCGT GACTTTGGTC GGATTGCTGC CCAAACTGCT AAACAAGTGG TAATGCAACG TCTCCGTGAA GAAGAACGGA AAATTATTTA CGACAGGTAC AAGACTTATG AAAACGAGAT TATCACTGGT GAAGTTTCAC GAGAAGATAA GCGTTTCACA TACGTTGATT TAGGAGATGG CGTAGAAGGT GCTATGGGCT TTAGAGATAA GATGCCTAAT GAGCACTACC ATGTCCATGA TCGGATTCAA GTATACGTAA CGAAAGTAAA TGACGATCGT CGGGGACCAC AAATCTTTGT TAGCCGGACT GCTCCAGAAC TTTTGAAGCG ATTATTTGAA CGAGAAGTGC CTGAAATCAA GGATGGGACT GTCTTAATCG AAAATATTGC TCGTGAAGCA GGTGATCGTG CTAAGGTTGC GGTATACTCA AATGATCCTA ATGTTGATCC AGTTGGGACT TGCGTTGGTC CACGAGGTTC TCGTGTCCAA GCAATCGTTA ATGAACTTGA TGGCGAGAAT ATGGATATTG TGGAATACGT TAAGGATCCC GCTAAGTTTA TCGCTAATGC GTTGAACCCA GCAGAAGTAC TTGATGTAAT CTTTAACGAA GAGAAGGCAG CAAGCGAAAC TGAGGATAGC GAAGGAGAAG AAACGACTGA AGGACAAACA GAACGTTCTT GCACTGTCGT TGTTCCAGAT AGCCAATTAT CCTTAGCCAT TGGTAAGCGG GGACAAAATG CTCGTCTCGC TGCTCGTTTG ACTAAGTACA AGATTGATAT CAAGTCTGAA TCTGAAATGG CTGAAAATGA TCAAGAATCT GAAGAAGTAG CTGATTCAGA AGAAAATATT GACAATAACG AAGAATAA
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Protein sequence | MSKPKINTEM IGALDYLEKE KGIKKEIVIE ALEQALESAY KQNYGDKNVE VEFNSLTGNI KVYAVKTITD DEEAVEADSN EFMSLADARK LPHGQGYDIG DEIREEVTPR DFGRIAAQTA KQVVMQRLRE EERKIIYDRY KTYENEIITG EVSREDKRFT YVDLGDGVEG AMGFRDKMPN EHYHVHDRIQ VYVTKVNDDR RGPQIFVSRT APELLKRLFE REVPEIKDGT VLIENIAREA GDRAKVAVYS NDPNVDPVGT CVGPRGSRVQ AIVNELDGEN MDIVEYVKDP AKFIANALNP AEVLDVIFNE EKAASETEDS EGEETTEGQT ERSCTVVVPD SQLSLAIGKR GQNARLAARL TKYKIDIKSE SEMAENDQES EEVADSEENI DNNEE
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