Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0607 |
Symbol | |
ID | 4029076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 674804 |
End bp | 677323 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637965775 |
Product | penicillin-binding protein 1A |
Protein accession | YP_572668 |
Protein GI | 92112740 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0360567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCTTT TCAAACGTTT GTTAACGTCC ATCCTATGGC TGATCGTCTC CCTGGGACTG GGCTGCGTGC TGGCCACCGT GGGCGCCGGT ATCTATTTCG CGCCGGGACT GCCCGATGTC CGGCAACTTC AGGGATTCGA GCTGCAGACG CCGCTGCGCG TCTACACCCA GGACGACAAG CTGATTGGCG AGTTCGGCGA ACAACGCCGC ACGCCGGTCA GCTACGACGA CATCCCCCAG TCCTTCATCG ATGCCCTGCT GGCCGCCGAG GACGCCCATT TCTTCGAGCA TCCCGGCATC GACCCCAAAG GACTGGCGCG AGCGGCCCTC GAGCTTGCCA CGAGCGGCAA CATTCAGTCG GGTGGCAGTA CCATCACCAT GCAGGTGGCG CGCAACTATC TGCTCACGCT GGACCAGACA TTCACGCGCA AGATTCGCGA GATTCTGCTG TCCCTGCAAA TGGAACAGGT GCTCGACAAG CAGAACATCC TCGAGCTCTA CGTCAACAAG ATCTACCTGG GCAATGGCGC CTACGGTATC GGTGCCGCCG CGGAAAGCTA CTACGACAAG CCACTCGCCG AGCTCGACCT GCCGCAGCTG GCCATGATGG CGGGCCTGCC CAAGGCCCCG TCGGCGCTCA ACCCCCTGAA CAATCCCGAG CGTTCGCTGA TTCGCCGCAA CTGGGTACTG CTGCGCATGC GCGAGCTGGG CTTCATCGAT CCGATCCAGT ACCAGGCGGC CGTCAAGGCG CCCATCACCG CGCACCGCGC GCAGTCCCAG TTCGAGGTCA ACGCCCCGTA CATCGCCGAA ATGGCACGCC AGTACGCGGT GGAACGCTTC GGCGATGACG CCTATACCGA CAATTTCCAG ATCAAGACGA CCATCGACAG TCGCCTGCAG ACCTTCGCGC GTAGCGCCCT CGTGAACGGC CTGATCGAGT ACGATACCCG CCATGGCTGG CGCGGCCCGG AGGAAACCGA CATTCCCTCG AGCCTGGTGG AAGCCCAGGA AAACACGGAT GCCCAGGGAC TCGAGGAAGA GCTGTCCGAA TCCCCCGAGG TCATGAAAAC CGCCCGCCAG GCCGCCAAGA GCAGCGAGCA GTCGATCGAG GGCGTCGACG GCGACGTCAG CAACTGGGTC AAGGTCCTCG ACCGGACGCC CCGTCATGGC CCTCTCGAAC CGGGCATCGT CGTCGAAGCC GGCGACCGCC AGCTGCAGGT GCTTACCCGC GACGATGGCG TGGTGACGAT CGGCTGGGAC GGCCTCGACT GGGCACGCGA GTACCACAGT GCCGAGTGGC GCGGCGAGGT ACCCGCCAAC GCCGCCGCCA TCGCCGAGCG TGGCGACCTG ATCCGGGTGA TGCGCACCGA TGACGGCGAC TGGCGCCTTT CCCAGGTGCC CGGCGCCCAG GGCGCGATCG TGATCATCGA TCCGCAGACC GGTGCCATTC GCGGCCTGCA GGGCGGCTTC AGCTTCTCGG CCAGCAAGTT CAACCGCGCC ATCCAGGCAC AACGCCAGGC AGGCTCGATC TTCAAGCCGT TCATCTATCT GGCCGCACTG CAGAACGGCA TGTCCGCCGC CACGATCATC AACGATGCGC CGGTGGTCAT GTCCGACGTG GGCGGTGACT GGCGCCCCGA GAACGCCGAG GGCGAATTCC GCGGCCCCAC CCGGTTGCGC GTCGGGCTCT ATCAATCGCG CAACCTGGTG ACCATCCGGG TCCTGCAGTC GCTGGGGCTG GACAATACCC TGAGCTTCCT GGAGAACTTC GGCTTCGCCA AGGGGCGGCT TCCCCACGGC CTGTCACTGG CCCTGGGCAG CGCCTCGCTG ACGCCGCTGG AAATGGCCAA TGCCTACGCG GTGCTCGCCA ATGGCGGCTT CCAGGTGGCC CCGTGGTACA TCCAGTCGGT CACACGGGGC AGCGACAACG AGGTCATCGA ACAGGCCAAC CCCGTGGTCG CGTGCCGGGA GTGCGACCCC GACCAGCAGA CCACCGTGAT CGACGGCGAG ACTCGACGCA TCGCCAAGCG CGTGGCCGAC CCCGAGACGA TGTACATCAT TCGCGACATG ATGCGCGACG TCATCGAGAA GGGTACCGGC CGGGGTGCGC TGGAGCTCAA CCGGCCCGAC ATCGTCGGCA AGACCGGCAC GACCAACGAC CAGCGCGACG CCTGGTTCTC GGGCTTCAAC GACGACCTGG TCGCCACGGT ATGGGTCGGC AAGGACGACA ACACCACGAC CGGCGAGTAC GGCTCGCAGG CCGCCCTGCC GATCTGGAAG GCGTTCATGC GCCAGGCACT GGACGGGCAG CCCGAAAGCA TGCCCTCGCG CCCCGACGAC GTCGTCGCCG TGCGCATCGA CCCGGAAACC GGCTTGCGCC TGCACAACGA TCAACCGGGC GGCATGCAGG AAATCTTCCG CAAGGACAAT CTGCCCGACT ACAAGCCGCG CTCGATCCAG CCCGAGCTTG AGGATCGCAG CGGTTCACAG GGCACCGGCA CCTACGATGC CATCTTCTGA
|
Protein sequence | MKLFKRLLTS ILWLIVSLGL GCVLATVGAG IYFAPGLPDV RQLQGFELQT PLRVYTQDDK LIGEFGEQRR TPVSYDDIPQ SFIDALLAAE DAHFFEHPGI DPKGLARAAL ELATSGNIQS GGSTITMQVA RNYLLTLDQT FTRKIREILL SLQMEQVLDK QNILELYVNK IYLGNGAYGI GAAAESYYDK PLAELDLPQL AMMAGLPKAP SALNPLNNPE RSLIRRNWVL LRMRELGFID PIQYQAAVKA PITAHRAQSQ FEVNAPYIAE MARQYAVERF GDDAYTDNFQ IKTTIDSRLQ TFARSALVNG LIEYDTRHGW RGPEETDIPS SLVEAQENTD AQGLEEELSE SPEVMKTARQ AAKSSEQSIE GVDGDVSNWV KVLDRTPRHG PLEPGIVVEA GDRQLQVLTR DDGVVTIGWD GLDWAREYHS AEWRGEVPAN AAAIAERGDL IRVMRTDDGD WRLSQVPGAQ GAIVIIDPQT GAIRGLQGGF SFSASKFNRA IQAQRQAGSI FKPFIYLAAL QNGMSAATII NDAPVVMSDV GGDWRPENAE GEFRGPTRLR VGLYQSRNLV TIRVLQSLGL DNTLSFLENF GFAKGRLPHG LSLALGSASL TPLEMANAYA VLANGGFQVA PWYIQSVTRG SDNEVIEQAN PVVACRECDP DQQTTVIDGE TRRIAKRVAD PETMYIIRDM MRDVIEKGTG RGALELNRPD IVGKTGTTND QRDAWFSGFN DDLVATVWVG KDDNTTTGEY GSQAALPIWK AFMRQALDGQ PESMPSRPDD VVAVRIDPET GLRLHNDQPG GMQEIFRKDN LPDYKPRSIQ PELEDRSGSQ GTGTYDAIF
|
| |