Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3402 |
Symbol | |
ID | 8359568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4195532 |
End bp | 4196509 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965575 |
Product | Taurine catabolism dioxygenase TauD/TfdA |
Protein accession | YP_003123070 |
Protein GI | 256422417 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.645048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATTT CATCAAGACA TATCGGGCGG ACGCCAACGA TAGATGAAGG TACATTTCCG CTCACTATAC GTTTTGACGG CGCTTCTGTC GAAGACTTCA TCGCCTGGTA TAAGTCTAAC AGAGACTGGC TGGATAGTAA CCTGCTGAAA AGCGGGGCTA TCCTGGTACA GGGAATGGAC ATCGACAGCG TTGACAAGTT TGAGTACATT ACCGGCTCCC TGGGGTCAAA ATTCAGAGAT TATCTTGATG GCAGTTACCC CCGCAGAAAC CTCAAAGGAC ATGTCTACAT CTCTACGGAA TACGATTCCA GCTACAACAT CACAATGCAT AATGAGCTGT CTTATTCCGC TAAATGGCCA ACACGCCTGA TATTCGGTTG CGTCATTCCT CCGGGAACTG GCGGAGAAAC ACCCCTGGTA GACAGCCGTA CTATCATTGA TGTAATGCCA GCCGAAATCC TCGAAGAGTT TGAAAGAAAA CAACTGCGCT ACATCAGAAA CCTCCACGCA GGACAGGGAA TGGGACCATC CTGGAAAGAT ACTTTCGGCA CGGACGACAA AGCTGTTGTT GAGCAGCACT GCCGCAGCAT CGATATCCAG TATGAATGGA AAAAGAATGA CGGTCTCCGG TTGATAAATC TTCGTCCTGC CACAAGGATA CATCCGGTGA CAGGAGAGAA GGTCTGGTTT AACCAGGCCG ACCAGTATCA CCCAACACAC TTCCCGGAAG AAGTATACAA AACATTAATG CGGATGTCAG CGGGTGTGGA AGAAGATCTT CCATTGTTCG TTTCCTTCGG CGATGGTAGT AAAATACCGG AATCGACGAT TCATGAAATT ATCCGCGTAA TTGATACCGT AACAGTGGTA AGGCCCTGGG AAAAAGGGGA TTTCGTAATA GTGGAAAATA TGCTGGTGGC GCATGGCCGT AAGGCCTACA CCGGCGACAG AAAGATCGTA GTATCTATGG TAGAATAA
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Protein sequence | MEISSRHIGR TPTIDEGTFP LTIRFDGASV EDFIAWYKSN RDWLDSNLLK SGAILVQGMD IDSVDKFEYI TGSLGSKFRD YLDGSYPRRN LKGHVYISTE YDSSYNITMH NELSYSAKWP TRLIFGCVIP PGTGGETPLV DSRTIIDVMP AEILEEFERK QLRYIRNLHA GQGMGPSWKD TFGTDDKAVV EQHCRSIDIQ YEWKKNDGLR LINLRPATRI HPVTGEKVWF NQADQYHPTH FPEEVYKTLM RMSAGVEEDL PLFVSFGDGS KIPESTIHEI IRVIDTVTVV RPWEKGDFVI VENMLVAHGR KAYTGDRKIV VSMVE
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