Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6067 |
Symbol | |
ID | 4314971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 627423 |
End bp | 628394 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638153911 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_777945 |
Protein GI | 115360808 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGAA CTTCCGCTTC CACTCCGTCC GCGCCGGTGT CGACCGGTGC GGCAAGCGCC AGAGCCGGCC GCTTCGCCGC GCTGTCGCGC TTCCTGCCGT CGGGCCGCAA CGTCGCGATC GGCGTGCCGT TCCTGTGGCT CACGATCTTC TTCGCGCTCC CGTTCGTGCT GGTGCTGAAG ATCAGCTTCG CCGACCAGGT GCTCGGCATT CCGCCGTATA CCGCGCTCGC ACGGCTGGAA TCCGGCACGG TCCAGCTCGT GTTGTCGCTG AAGCATTACG CGTTGCTGCT GCAGGACGAC CTGTATCTGA AAACCTACGT CAGTTCACTG AAGATGGCCG CCGCGTCGAC GCTGATGTGC GTGCTCGCCG GCTATCCGAT CGCGTACTGC ATCGCCCGCG CGGCGCCGGC ACGCCGCAAC CTGCTGATGA TGGCCGTGAT GCTGCCGTTC TGGACGTCGT TCCTGATTCG CGTCTATGCA TGGGTCGGGA TCATGAAGGA CGACGGCCTG CTGAATCGCG CGCTGGCGGC GCTCGGCGTG ATCGCGACGC CGCTGCGCCT CTATCACACG GACGCGGGCG TCTACATCGG GATGGTCTAT TCGTACCTGC CGTTCATGGT GATGCCGCTC TATGCGCACC TCGTGAAGAT GGACCTCACG CTGCTCGAGG CCGCGCACGA TCTCGGCGCG ACGCCGTGGT CCGCGTTCTG GCGCATCACG CTGCCGCTGT CGCGCAACGG AATCGTCGCG GGCAGCCTGC TCGTGTTCAT CCCGGCCGTC GGCGAATACG TGATCCCGGA ACTGCTCGGC GGCGCGAACA CGCTGATGCT CGGCCGCGTG ATGTGGGACG AGTTCTTCAA CAACATGGAC TGGCCGATGG CGTCCGCGGT GACGGTGACG ATGGTGGCGC TGCTGCTCGT GCCGATGGCG CTGCTCCATT ACAGCCAGGC CGAAGCGGAG GGGCGCTCAT GA
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Protein sequence | MIRTSASTPS APVSTGAASA RAGRFAALSR FLPSGRNVAI GVPFLWLTIF FALPFVLVLK ISFADQVLGI PPYTALARLE SGTVQLVLSL KHYALLLQDD LYLKTYVSSL KMAAASTLMC VLAGYPIAYC IARAAPARRN LLMMAVMLPF WTSFLIRVYA WVGIMKDDGL LNRALAALGV IATPLRLYHT DAGVYIGMVY SYLPFMVMPL YAHLVKMDLT LLEAAHDLGA TPWSAFWRIT LPLSRNGIVA GSLLVFIPAV GEYVIPELLG GANTLMLGRV MWDEFFNNMD WPMASAVTVT MVALLLVPMA LLHYSQAEAE GRS
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