Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1282 |
Symbol | rnhB |
ID | 3683122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1572821 |
End bp | 1573498 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637716620 |
Product | ribonuclease HII |
Protein accession | YP_321801 |
Protein GI | 75907505 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000227459 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTAA AGAAGGCGCA AACTACTGAT AATCTAAAGT TGCCAATATC CCTAAATGCA ACTGGTTGGC TGGAGTCCTC CCCTGATTGG TCGAATATTT CAGGCCTGGT GGCAGGAGTA GATGAAGTAG GTCGGGGCGC TCTCTTTGGG CCTGTAGTGG CAGCATCTGT TATACTACCA GCTAGCTCTT TTCCTCAGCT GATGACAGCT GAGATTAAAG ATAGCAAGAA ACTATCTCAT TCTCGCAGAG TTCAGCTAGC GCAGCAAATT TCTACGCTAG CTATAGACTG GAGAATTGGT TATGCAACAA CGGCTGAAAT TGACCGAATT AATATTTTGC AGGCAACACT GTTAGCCATG AGACGGTCTG TAAAAAAGCT GAAATTACAG CCCATACTCT GTTTGGTGGA TGGGAATCAA CCAGTACAGG ACTTGCCAAT TTTACAACAA ACTATTGTTA AGGGAGATGA GCGATCGCTC AATATTGCCG CGGCCAGCAT CATGGCTAAA GTTTGGCGTG ACGATTTGAT ACAGCGTCTA TCAACCAAAT ATCCGATGTA TGATTTAAAG AGTAACAAGG GATATGGTAG CAAAAAGCAT TTGTTAGCTC TGGAAAAACA CGGAGCTTCA CCCTTACATC GTCAGTCGTT CCGCCCTTGT CAAATATCAC TTGACTAG
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Protein sequence | MMLKKAQTTD NLKLPISLNA TGWLESSPDW SNISGLVAGV DEVGRGALFG PVVAASVILP ASSFPQLMTA EIKDSKKLSH SRRVQLAQQI STLAIDWRIG YATTAEIDRI NILQATLLAM RRSVKKLKLQ PILCLVDGNQ PVQDLPILQQ TIVKGDERSL NIAAASIMAK VWRDDLIQRL STKYPMYDLK SNKGYGSKKH LLALEKHGAS PLHRQSFRPC QISLD
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