21 Unclonable genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Pnec_0044  CDS  NC_010531  52877  52981  +  105  hypothetical protein  YP_001796986  unclonable  0.0000000000000269005  hitchhiker  4.99505e-21  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0045  CDS  NC_010531  53034  53414  +  381  30S ribosomal protein S12  YP_001796987  unclonable  0.0000000000000913228  hitchhiker  7.76086e-21  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0048  CDS  NC_010531  56222  57412  +  1191  elongation factor Tu  YP_001796990  unclonable  0.0000000000026192  decreased coverage  9.37064e-25  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0049  CDS  NC_010531  57529  57840  +  312  30S ribosomal protein S10  YP_001796991  unclonable  0.0000000000000291739  decreased coverage  2.20907e-25  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0050  CDS  NC_010531  58039  58695  +  657  50S ribosomal protein L3  YP_001796992  unclonable  0.000000000000105165  decreased coverage  1.58179e-26  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0051  CDS  NC_010531  58707  59327  +  621  50S ribosomal protein L4  YP_001796993  unclonable  0.000000000000062417  hitchhiker  3.36643e-25  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0052  CDS  NC_010531  59324  59638  +  315  50S ribosomal protein L23  YP_001796994  unclonable  0.0000000000000136053  hitchhiker  3.59649e-24  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0053  CDS  NC_010531  59641  60471  +  831  50S ribosomal protein L2  YP_001796995  unclonable  0.000000000000139225  hitchhiker  1.23059e-22  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0054  CDS  NC_010531  60491  60769  +  279  30S ribosomal protein S19  YP_001796996  unclonable  0.0000000000000130645  hitchhiker  4.7991899999999994e-20  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0055  CDS  NC_010531  60774  61109  +  336  50S ribosomal protein L22  YP_001796997  unclonable  0.0000000000000185707  hitchhiker  6.04207e-20  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0056  CDS  NC_010531  61118  61933  +  816  ribosomal protein S3  YP_001796998  unclonable  0.000000000000180668  hitchhiker  1.0517300000000001e-18  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0057  CDS  NC_010531  61936  62349  +  414  50S ribosomal protein L16  YP_001796999  unclonable  0.0000000000000274594  hitchhiker  4.45125e-19  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0058  CDS  NC_010531  62364  62558  +  195  50S ribosomal protein L29  YP_001797000  unclonable  0.00000000000000783638  hitchhiker  2.2701500000000002e-18  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0059  CDS  NC_010531  62571  62840  +  270  30S ribosomal protein S17  YP_001797001  unclonable  0.0000000000000129273  hitchhiker  1.52646e-17  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0060  CDS  NC_010531  63024  63392  +  369  50S ribosomal protein L14  YP_001797002  unclonable  0.0000000000000171332  hitchhiker  1.54022e-17  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0144    NC_010531  126450  127033  +  584      unclonable  0.000000000000103025  normal  0.191017  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0185  CDS  NC_010531  166393  167622  +  1230  cell division protein FtsA  YP_001797104  unclonable  0.00000000000415608  normal  0.589058  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0453  CDS  NC_010531  402736  405339  +  2604  ATP-dependent chaperone ClpB  YP_001797337  unclonable  0.00000000117348  normal  1  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_1204  CDS  NC_010531  1042010  1044277  -  2268  Lysine decarboxylase  YP_001797963  unclonable  0.000000000345453  normal  0.552697  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_1549  CDS  NC_010531  1348941  1350029  -  1089  recA protein  YP_001798245  unclonable  0.00000000000205683  normal  1  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_R0005  rRNA  NC_010531  35994  38804  +  2811  23S ribosomal RNA    unclonable  0.00000000415138  hitchhiker  0.00000000363122  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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