6 homologs were found in PanDaTox collection
for query gene YpAngola_B0003 on replicon NC_010157
Organism: Yersinia pestis Angola



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010157  YpAngola_B0003  outer membrane virulence protein YopE  100 
 
 
219 aa  443  1e-123  Yersinia pestis Angola  Bacteria  normal  normal  0.292287 
 
 
-
 
NC_008463  PA14_00560  exoenzyme T  29.5 
 
 
442 aa  65.5  0.0000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.507826  normal  0.0561586 
 
 
-
 
NC_011080  SNSL254_A3083  effector protein SptP  32.73 
 
 
535 aa  61.2  0.00000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.193495  hitchhiker  0.00000941933 
 
 
-
 
NC_011205  SeD_A3188  effector protein SptP  32.73 
 
 
535 aa  61.2  0.00000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3031  effector protein SptP  30.91 
 
 
535 aa  60.8  0.00000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.493987  normal  0.0451218 
 
 
-
 
NC_011149  SeAg_B3000  effector protein SptP  31.82 
 
 
535 aa  60.5  0.00000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00132386  n/a   
 
 
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