15 homologs were found in PanDaTox collection
for query gene YpAngola_0053 on replicon NC_010158
Organism: Yersinia pestis Angola



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010158  YpAngola_0053    100 
 
 
648 bp  1285    Yersinia pestis Angola  Bacteria  hitchhiker  1.1034999999999999e-81  normal 
 
 
-
 
NC_009832  Spro_3271  ribonucleotide-diphosphate reductase subunit alpha  82.35 
 
 
2289 bp  60  0.0000008  Serratia proteamaculans 568  Bacteria  normal  0.838311  normal 
 
 
-
 
NC_009436  Ent638_2801  ribonucleotide-diphosphate reductase subunit alpha  84.72 
 
 
2286 bp  56  0.00001  Enterobacter sp. 638  Bacteria  normal  0.768732  normal  0.31743 
 
 
-
 
CP001509  ECD_02160  ribonucleotide-diphosphate reductase alpha subunit  87.76 
 
 
2286 bp  50.1  0.0008  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1425  ribonucleoside-diphosphate reductase, alpha subunit  87.76 
 
 
2286 bp  50.1  0.0008  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2374  ribonucleotide-diphosphate reductase subunit alpha  87.76 
 
 
2286 bp  50.1  0.0008  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1417  ribonucleotide-diphosphate reductase subunit alpha  87.76 
 
 
2286 bp  50.1  0.0008  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0448641 
 
 
-
 
NC_010498  EcSMS35_2385  ribonucleotide-diphosphate reductase subunit alpha  87.76 
 
 
2286 bp  50.1  0.0008  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2517  ribonucleotide-diphosphate reductase subunit alpha  81.72 
 
 
2286 bp  50.1  0.0008  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.299874 
 
 
-
 
NC_011149  SeAg_B2413  ribonucleotide-diphosphate reductase subunit alpha  81.72 
 
 
2286 bp  50.1  0.0008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2621  ribonucleotide-diphosphate reductase subunit alpha  81.72 
 
 
2343 bp  50.1  0.0008  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0895131 
 
 
-
 
NC_011353  ECH74115_3368  ribonucleotide-diphosphate reductase subunit alpha  87.76 
 
 
2286 bp  50.1  0.0008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_02119  hypothetical protein  87.76 
 
 
2286 bp  50.1  0.0008  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003109  ribonucleotide reductase of class Ia (aerobic) alpha subunit  90.24 
 
 
2283 bp  50.1  0.0008  Vibrio sp. Ex25  Bacteria  normal  0.810994  n/a   
 
 
-
 
NC_012912  Dd1591_3021  ribonucleotide-diphosphate reductase subunit alpha  87.5 
 
 
2289 bp  48.1  0.003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
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