13 homologs were found in PanDaTox collection
for query gene YPK_4164 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010465  YPK_4164  phage transcriptional regulator, AlpA  100 
 
 		 111 aa  234  2e-61  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
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NC_011083  SeHA_C2916  hypothetical protein  39.68 
 
 		 71 aa  63.5  0.0000000009  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.0151072 
 
 
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NC_012912  Dd1591_3999  phage transcriptional regulator, AlpA  33.82 
 
 		 73 aa  57.4  0.00000007  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E4074  prophage CP4-57 transcriptional regulator protein, AlpA family  38.33 
 
 		 67 aa  54.3  0.0000006  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
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NC_009708  YpsIP31758_0052  AlpA family protein  36.11 
 
 		 72 aa  53.1  0.000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
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NC_008781  Pnap_2647  phage transcriptional regulator, AlpA  34.09 
 
 		 99 aa  49.3  0.00002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.561407  normal  1 
 
 
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NC_011662  Tmz1t_2796  phage transcriptional regulator, AlpA  46.15 
 
 		 109 aa  47  0.00008  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011883  Ddes_1227  phage transcriptional regulator, AlpA  31.58 
 
 		 78 aa  45.1  0.0003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0127458  n/a   
 
 
-
 
NC_007404  Tbd_2004  transcriptional regulator  38.89 
 
 		 68 aa  44.7  0.0004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_2246  prophage CP4-57 regulatory  32.2 
 
 		 91 aa  43.5  0.0009  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.422477 
 
 
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NC_007298  Daro_2566  prophage CP4-57 regulatory  33.33 
 
 		 91 aa  43.5  0.0009  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.37333 
 
 
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NC_008782  Ajs_1562  phage transcriptional regulator, AlpA  33.87 
 
 		 79 aa  43.1  0.001  Acidovorax sp. JS42  Bacteria  normal  0.544133  normal  0.10217 
 
 
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NC_012856  Rpic12D_3451  phage transcriptional regulator, AlpA  36.36 
 
 		 76 aa  40.4  0.008  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
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