23 homologs were found in PanDaTox collection
for query gene XfasM23_1260 on replicon NC_010577
Organism: Xylella fastidiosa M23



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010577  XfasM23_1260  CopG/DNA-binding domain-containing protein  100 
 
 
83 aa  170  6.999999999999999e-42  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1291  anti-toxin protein  100 
 
 
96 aa  169  1e-41  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1616  CopG/DNA-binding domain-containing protein  73.33 
 
 
75 aa  114  5e-25  Parvibaculum lavamentivorans DS-1  Bacteria  decreased coverage  0.000000000000428775  normal 
 
 
-
 
NC_007614  Nmul_A0599  helix-turn-helix protein, CopG  62.67 
 
 
75 aa  108  2.0000000000000002e-23  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009036  Sbal_4391  helix-turn-helix protein, CopG  50 
 
 
74 aa  77.4  0.00000000000006  Shewanella baltica OS155  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2095  CopG domain protein DNA-binding domain protein  48.68 
 
 
82 aa  73.9  0.0000000000007  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1339  CopG domain protein DNA-binding domain protein  46.05 
 
 
82 aa  70.9  0.000000000006  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_3232  hypothetical protein  47.95 
 
 
75 aa  70.1  0.00000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.706269  n/a   
 
 
-
 
NC_008639  Cpha266_1377  CopG family transcriptional regulator  45.83 
 
 
74 aa  68.6  0.00000000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1626  CopG domain protein DNA-binding domain protein  44.44 
 
 
74 aa  63.2  0.000000001  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00111778  n/a   
 
 
-
 
NC_007643  Rru_A3195  helix-turn-helix protein, CopG  45.83 
 
 
74 aa  62.4  0.000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007515  Gmet_A3570  CopG-like DNA-binding protein  43.66 
 
 
74 aa  60.1  0.00000001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00677722  n/a   
 
 
-
 
NC_013946  Mrub_0379  CopG domain-containing protein DNA-binding domain-containing protein  43.06 
 
 
70 aa  55.8  0.0000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_24260  predicted DNA-binding protein with an HTH domain  41.89 
 
 
77 aa  55.1  0.0000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.322947  normal 
 
 
-
 
NC_010625  Bphy_7187  hypothetical protein  40 
 
 
91 aa  55.1  0.0000004  Burkholderia phymatum STM815  Bacteria  unclonable  0.00000000000770139  normal  0.990213 
 
 
-
 
NC_013889  TK90_1569  CopG domain protein DNA-binding domain protein  40.58 
 
 
73 aa  50.1  0.00001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_011061  Paes_2403  CopG domain protein DNA-binding domain protein  50 
 
 
73 aa  42.7  0.002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1965  CopG-like DNA-binding  40.48 
 
 
69 aa  42.4  0.002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0374946  n/a   
 
 
-
 
NC_008787  CJJ81176_1238  hypothetical protein  31.67 
 
 
82 aa  42  0.003  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  decreased coverage  0.00000000115747  n/a   
 
 
-
 
NC_011060  Ppha_1271  CopG domain protein DNA-binding domain protein  28 
 
 
72 aa  41.6  0.003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_1107  ribbon-helix-helix protein, copG family  37.04 
 
 
73 aa  42  0.003  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1360  hypothetical protein  31.67 
 
 
82 aa  42  0.003  Campylobacter jejuni RM1221  Bacteria  normal  0.937532  n/a   
 
 
-
 
NC_007614  Nmul_A0325  helix-turn-helix protein, CopG  31.94 
 
 
128 aa  40.8  0.007  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
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