40 homologs were found in PanDaTox collection
for query gene Xcel_2892 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_2892  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  100 
 
 
537 aa  1079    Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2619  coenzyme F420 hydrogenase/dehydrogenase beta subunit  37.61 
 
 
468 aa  296  6e-79  Marinobacter aquaeolei VT8  Bacteria  normal  0.912572  n/a   
 
 
-
 
NC_009620  Smed_3880  hypothetical protein  37.27 
 
 
459 aa  249  9e-65  Sinorhizobium medicae WSM419  Bacteria  normal  0.712619  normal 
 
 
-
 
NC_011832  Mpal_0828  4Fe-4S ferredoxin iron-sulfur binding domain protein  33.42 
 
 
836 aa  182  1e-44  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.241556 
 
 
-
 
NC_008553  Mthe_0959  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  35.81 
 
 
453 aa  182  1e-44  Methanosaeta thermophila PT  Archaea  normal  0.848293  n/a   
 
 
-
 
NC_009051  Memar_0955  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  31.88 
 
 
463 aa  157  4e-37  Methanoculleus marisnigri JR1  Archaea  normal  0.157749  n/a   
 
 
-
 
NC_009714  CHAB381_0961  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  26.43 
 
 
407 aa  140  7e-32  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.925835  n/a   
 
 
-
 
NC_009455  DehaBAV1_0139  coenzyme F420 hydrogenase/dehydrogenase beta subunit  26.79 
 
 
428 aa  113  7.000000000000001e-24  Dehalococcoides sp. BAV1  Bacteria  normal  0.668002  n/a   
 
 
-
 
NC_002936  DET0214  iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit, putative  25.26 
 
 
428 aa  110  7.000000000000001e-23  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2944  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  25.26 
 
 
409 aa  67.4  0.0000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_4481  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  25.23 
 
 
418 aa  66.6  0.000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009958  Dshi_4135  hypothetical protein  26.52 
 
 
440 aa  62  0.00000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_3268  putative coenzyme F420 hydrogenase  26.51 
 
 
409 aa  60.8  0.00000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.96965 
 
 
-
 
NC_007355  Mbar_A0255  F420H2 dehydrogenase subunit F  28.9 
 
 
346 aa  60.1  0.0000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009051  Memar_2177  coenzyme F420-reducing hydrogenase subunit beta  25.72 
 
 
298 aa  58.2  0.0000004  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0585  coenzyme F420 hydrogenase/dehydrogenase beta subunit  22.77 
 
 
395 aa  56.6  0.000001  Methanococcus maripaludis C6  Archaea  hitchhiker  0.00081136  n/a   
 
 
-
 
NC_011832  Mpal_0087  coenzyme F420-reducing hydrogenase subunit beta  24.73 
 
 
291 aa  55.8  0.000002  Methanosphaerula palustris E1-9c  Archaea  normal  0.127818  normal  0.061617 
 
 
-
 
NC_007796  Mhun_0783  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  26.57 
 
 
337 aa  55.1  0.000003  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.00366682  normal  0.213871 
 
 
-
 
NC_007955  Mbur_2371  F420H2 dehydrogenase subunit F  23.33 
 
 
343 aa  54.7  0.000004  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0881  coenzyme F420 hydrogenase, beta subunit  21.49 
 
 
387 aa  53.9  0.000008  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008553  Mthe_0174  coenzyme F420 hydrogenase/dehydrogenase beta subunit  25.87 
 
 
362 aa  53.1  0.00001  Methanosaeta thermophila PT  Archaea  normal  0.318509  n/a   
 
 
-
 
NC_007796  Mhun_2329  coenzyme F420-reducing hydrogenase subunit beta  24.64 
 
 
288 aa  53.5  0.00001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008942  Mlab_0012  coenzyme F420-reducing hydrogenase subunit beta  26.39 
 
 
290 aa  52  0.00002  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_0076  coenzyme F420-reducing hydrogenase subunit beta  23.71 
 
 
282 aa  52.4  0.00002  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0449  coenzyme F420-reducing hydrogenase subunit beta  22.89 
 
 
291 aa  51.2  0.00005  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007643  Rru_A0937  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  28.17 
 
 
410 aa  50.1  0.0001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0778  nitrite and sulphite reductase 4Fe-4S region  24.68 
 
 
618 aa  49.3  0.0002  Methanococcus aeolicus Nankai-3  Archaea  normal  0.542223  n/a   
 
 
-
 
NC_009943  Dole_1150  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.73 
 
 
364 aa  48.9  0.0002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_0300  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  25.2 
 
 
412 aa  49.3  0.0002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_0331  coenzyme F420 hydrogenase/dehydrogenase beta subunit  25.76 
 
 
339 aa  48.9  0.0002  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2290  coenzyme F420-reducing hydrogenase subunit beta  24.04 
 
 
291 aa  48.1  0.0004  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.107219 
 
 
-
 
NC_009135  MmarC5_0646  coenzyme F420-reducing hydrogenase subunit beta  23.81 
 
 
282 aa  47.4  0.0006  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0964  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein  25.65 
 
 
400 aa  47  0.001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0907338  n/a   
 
 
-
 
NC_007355  Mbar_A1562  formate dehydrogenase, beta subunit (F420)  26.61 
 
 
401 aa  45.8  0.002  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_2707  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  24.92 
 
 
341 aa  45.1  0.003  Methanosphaerula palustris E1-9c  Archaea  normal  0.889848  normal  0.835032 
 
 
-
 
NC_007355  Mbar_A0662  coenzyme F420 hydrogenase beta subunit  23.92 
 
 
344 aa  44.7  0.004  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.368347 
 
 
-
 
NC_007778  RPB_4023  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  23.9 
 
 
410 aa  43.9  0.007  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.53217  normal 
 
 
-
 
NC_011004  Rpal_1688  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  24.5 
 
 
409 aa  43.5  0.008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_1144  coenzyme F420 hydrogenase/dehydrogenase beta subunit  27.55 
 
 
375 aa  43.5  0.009  Methanococcus vannielii SB  Archaea  normal  0.592396  n/a   
 
 
-
 
NC_007958  RPD_3777  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  23.9 
 
 
410 aa  43.5  0.01  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0498224  normal  0.0688938 
 
 
-
 
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