More than 300 homologs were found in PanDaTox collection
for query gene Vapar_1531 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_1531  two component transcriptional regulator, LuxR family  100 
 
 		 229 aa  468  1.0000000000000001e-131  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_0782  two component LuxR family transcriptional regulator  45.29 
 
 		 248 aa  177  2e-43  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  35.4 
 
 		 222 aa  117  9.999999999999999e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  33.48 
 
 		 220 aa  109  4.0000000000000004e-23  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013510  Tcur_1651  two component transcriptional regulator, LuxR family  32.27 
 
 		 218 aa  109  4.0000000000000004e-23  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000163278  n/a   
 
 
-
 
NC_008009  Acid345_0972  two component LuxR family transcriptional regulator  29.91 
 
 		 227 aa  108  7.000000000000001e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.299836  normal  0.0302219 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  32.26 
 
 		 217 aa  108  1e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  29.33 
 
 		 253 aa  107  2e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  29.86 
 
 		 216 aa  107  2e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  33.04 
 
 		 220 aa  105  7e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  32.73 
 
 		 216 aa  104  9e-22  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.09 
 
 		 216 aa  104  1e-21  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30.88 
 
 		 214 aa  104  1e-21  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  32.11 
 
 		 235 aa  104  1e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  31.63 
 
 		 218 aa  104  1e-21  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  32.88 
 
 		 217 aa  103  2e-21  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  30.36 
 
 		 250 aa  102  4e-21  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  32.58 
 
 		 236 aa  102  4e-21  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  31.86 
 
 		 219 aa  102  4e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  33.33 
 
 		 219 aa  102  5e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  29.91 
 
 		 234 aa  102  5e-21  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  28.25 
 
 		 234 aa  102  5e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  33.95 
 
 		 210 aa  102  5e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  31.86 
 
 		 219 aa  102  6e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  31.8 
 
 		 217 aa  102  7e-21  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  33.02 
 
 		 221 aa  102  7e-21  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1358  two component LuxR family transcriptional regulator  32.54 
 
 		 220 aa  102  7e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110964  normal  1 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  34.72 
 
 		 217 aa  102  7e-21  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  31.94 
 
 		 212 aa  101  8e-21  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  32.03 
 
 		 233 aa  101  8e-21  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013124  Afer_0180  two component transcriptional regulator, LuxR family  33.02 
 
 		 216 aa  101  9e-21  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.245465  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  29.1 
 
 		 238 aa  101  9e-21  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  32.57 
 
 		 213 aa  100  2e-20  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  32 
 
 		 223 aa  100  2e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.172592 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  32.68 
 
 		 207 aa  100  2e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  30.88 
 
 		 209 aa  100  3e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  32.55 
 
 		 209 aa  99.4  4e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  31.02 
 
 		 218 aa  99.8  4e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  34.31 
 
 		 208 aa  99.4  4e-20  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  32.57 
 
 		 212 aa  99  5e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  29.49 
 
 		 231 aa  99  5e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  32.23 
 
 		 254 aa  99  5e-20  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  32.13 
 
 		 214 aa  99  6e-20  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  29.67 
 
 		 209 aa  99  6e-20  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  31.39 
 
 		 218 aa  98.6  7e-20  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  31.39 
 
 		 218 aa  98.6  7e-20  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_007973  Rmet_2087  two component LuxR family transcriptional regulator  33.18 
 
 		 217 aa  97.8  1e-19  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.332036 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  31.34 
 
 		 209 aa  98.2  1e-19  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  29.36 
 
 		 303 aa  97.4  2e-19  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  32.88 
 
 		 227 aa  97.1  2e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  31.82 
 
 		 225 aa  96.7  3e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  29.65 
 
 		 222 aa  96.7  3e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  30.45 
 
 		 231 aa  96.3  3e-19  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  30.88 
 
 		 212 aa  96.7  3e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  28.83 
 
 		 220 aa  96.7  3e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  29.31 
 
 		 242 aa  96.3  4e-19  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  33.33 
 
 		 218 aa  95.9  4e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  32.06 
 
 		 219 aa  96.3  4e-19  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  29.49 
 
 		 217 aa  96.3  4e-19  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  32.06 
 
 		 219 aa  96.3  4e-19  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  30.41 
 
 		 214 aa  96.3  4e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.785726 
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  32.06 
 
 		 219 aa  96.3  4e-19  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal  1 
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  31.94 
 
 		 227 aa  95.9  4e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  27.85 
 
 		 216 aa  95.9  5e-19  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  29.63 
 
 		 241 aa  95.1  7e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  29.87 
 
 		 237 aa  95.1  7e-19  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  33.33 
 
 		 207 aa  95.1  7e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  30.77 
 
 		 213 aa  95.1  8e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  32.87 
 
 		 218 aa  95.1  8e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  32.87 
 
 		 218 aa  95.1  8e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  33.63 
 
 		 221 aa  95.1  8e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_007651  BTH_I1849  DNA-binding response regulator NarL  32.91 
 
 		 233 aa  95.1  9e-19  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  31.96 
 
 		 225 aa  95.1  9e-19  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.665179 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  30.53 
 
 		 223 aa  94.4  1e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  29.36 
 
 		 237 aa  94.7  1e-18  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  30.14 
 
 		 213 aa  94.4  1e-18  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  29.82 
 
 		 221 aa  94.7  1e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  31.34 
 
 		 223 aa  94.7  1e-18  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  33.33 
 
 		 216 aa  94.4  1e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  31.58 
 
 		 230 aa  94  2e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  30.56 
 
 		 221 aa  93.6  2e-18  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  32.74 
 
 		 213 aa  93.6  2e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  31.71 
 
 		 223 aa  93.6  2e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  29.49 
 
 		 208 aa  94  2e-18  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  30.14 
 
 		 233 aa  94.4  2e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006274  BCZK1321  response regulator  27.98 
 
 		 210 aa  92.8  3e-18  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  29.17 
 
 		 213 aa  93.2  3e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  28.38 
 
 		 225 aa  93.2  3e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  32.87 
 
 		 206 aa  93.2  3e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  hitchhiker  0.00252848 
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  31.39 
 
 		 231 aa  93.2  3e-18  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  32.88 
 
 		 234 aa  93.2  3e-18  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  31.34 
 
 		 207 aa  92.8  4e-18  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  34.48 
 
 		 208 aa  92.8  4e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  29.44 
 
 		 224 aa  92.8  4e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  30.26 
 
 		 216 aa  92.8  4e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_009675  Anae109_3355  two component LuxR family transcriptional regulator  35.96 
 
 		 232 aa  92.8  4e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  29.95 
 
 		 228 aa  92.8  4e-18  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  31.48 
 
 		 206 aa  92.8  4e-18  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  31.34 
 
 		 207 aa  92.8  4e-18  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  28.9 
 
 		 218 aa  92.4  5e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
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