10 homologs were found in PanDaTox collection
for query gene VSAL_II0400 on replicon NC_011313
Organism: Aliivibrio salmonicida LFI1238



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011313  VSAL_II0400  putative HTH-type transcriptional regulator  100 
 
 		 127 aa  255  2e-67  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.06586  n/a   
 
 
-
 
NC_010001  Cphy_2912  XRE family transcriptional regulator  32.81 
 
 		 200 aa  44.3  0.0005  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_2252  transcriptional repressor DicA  29.23 
 
 		 131 aa  44.3  0.0006  Escherichia coli E24377A  Bacteria  unclonable  0.000000000000218001  n/a   
 
 
-
 
NC_009665  Shew185_1965  putative phage repressor  32.84 
 
 		 263 aa  43.9  0.0007  Shewanella baltica OS185  Bacteria  normal  0.526038  n/a   
 
 
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NC_010658  SbBS512_E1248  helix-turn-helix domain protein  27.03 
 
 		 109 aa  43.9  0.0007  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.000139831  n/a   
 
 
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NC_008044  TM1040_1733  XRE family transcriptional regulator  24.77 
 
 		 133 aa  43.1  0.001  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012880  Dd703_0308  transcriptional regulator, XRE family  33.33 
 
 		 144 aa  43.1  0.001  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
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NC_012880  Dd703_1998  transcriptional regulator, XRE family  33.33 
 
 		 131 aa  43.5  0.001  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0219  putative phage repressor  29.87 
 
 		 235 aa  42.7  0.002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.449525  n/a   
 
 
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NC_009952  Dshi_0763  transcriptional regulator  32 
 
 		 130 aa  42.4  0.002  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.305784 
 
 
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