8 homologs were found in PanDaTox collection
for query gene VSAL_I3030 on replicon NC_011312
Organism: Aliivibrio salmonicida LFI1238



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011312  VSAL_I3030  putative lipopolysaccharide biosynthesis protein  100 
 
 
333 aa  675    Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1262  hypothetical protein  28.92 
 
 
349 aa  147  2.0000000000000003e-34  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0965  hypothetical protein  27.46 
 
 
321 aa  107  3e-22  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.946422  n/a   
 
 
-
 
NC_013162  Coch_0966  hypothetical protein  28.53 
 
 
327 aa  106  7e-22  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0062  hypothetical protein  23.21 
 
 
335 aa  80.5  0.00000000000003  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0044  hypothetical protein  23.12 
 
 
333 aa  79.3  0.00000000000008  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1209  hypothetical protein  23.23 
 
 
341 aa  58.5  0.0000002  Psychrobacter arcticus 273-4  Bacteria  normal  hitchhiker  0.00980857 
 
 
-
 
CP001637  EcDH1_0076  hypothetical protein  36.36 
 
 
311 aa  45.4  0.001  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
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