More than 300 homologs were found in PanDaTox collection
for query gene VIBHAR_02430 on replicon NC_009783
Organism: Vibrio harveyi ATCC BAA-1116



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009783  VIBHAR_02430  response regulator  100 
 
 
228 aa  464  9.999999999999999e-131  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003320  transcriptional regulatory protein CitB  87.72 
 
 
228 aa  414  9.999999999999999e-116  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1209  response regulator  70.54 
 
 
228 aa  322  2e-87  Vibrio cholerae O395  Bacteria  decreased coverage  0.000538312  n/a   
 
 
-
 
NC_011312  VSAL_I2186  HTH-type transcriptional regulator, two-component response regulator  60 
 
 
224 aa  282  3.0000000000000004e-75  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1864  response regulator receiver/unknown domain-containing protein  60.45 
 
 
230 aa  279  3e-74  Psychromonas ingrahamii 37  Bacteria  normal  0.134891  normal  0.12527 
 
 
-
 
NC_008740  Maqu_2899  response regulator receiver/unknown domain-containing protein  47.98 
 
 
228 aa  218  7.999999999999999e-56  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3992  response regulator receiver/unknown domain-containing protein  47.53 
 
 
231 aa  215  4e-55  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000025564  normal 
 
 
-
 
NC_013173  Dbac_2442  response regulator receiver and unknown domain protein  49.1 
 
 
227 aa  205  4e-52  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2788  response regulator receiver and unknown domain protein  47.58 
 
 
230 aa  204  1e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_3431  response regulator receiver/unknown domain-containing protein  44.59 
 
 
226 aa  201  9e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0939  response regulator receiver  44.59 
 
 
226 aa  200  9.999999999999999e-51  Shewanella baltica OS195  Bacteria  normal  normal  0.0896662 
 
 
-
 
NC_009665  Shew185_0905  response regulator receiver  44.59 
 
 
226 aa  199  1.9999999999999998e-50  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0877  response regulator receiver/unknown domain-containing protein  45.05 
 
 
226 aa  199  1.9999999999999998e-50  Shewanella sp. MR-7  Bacteria  normal  0.452942  normal 
 
 
-
 
NC_008321  Shewmr4_3095  response regulator receiver/unknown domain-containing protein  44.59 
 
 
226 aa  199  3.9999999999999996e-50  Shewanella sp. MR-4  Bacteria  normal  0.0654926  normal 
 
 
-
 
NC_011663  Sbal223_0930  response regulator receiver  44.39 
 
 
226 aa  198  6e-50  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0473  response regulator receiver  42.54 
 
 
230 aa  190  2e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0317  transcriptional regulator CitB  44.64 
 
 
230 aa  189  4e-47  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0471  response regulator  42.22 
 
 
230 aa  186  2e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0621  DNA-binding response regulator  42.22 
 
 
230 aa  185  4e-46  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0616  response regulator  42.22 
 
 
230 aa  185  5e-46  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A0689  response regulator  42.22 
 
 
230 aa  184  7e-46  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0596  response regulator  42.22 
 
 
230 aa  184  9e-46  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4743  response regulator  42.22 
 
 
230 aa  183  1.0000000000000001e-45  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3172  response regulator receiver/unknown domain-containing protein  40.64 
 
 
228 aa  177  1e-43  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00871756  normal 
 
 
-
 
NC_012793  GWCH70_0514  response regulator receiver and unknown domain protein  41.82 
 
 
227 aa  174  7e-43  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3002  response regulator receiver/unknown domain-containing protein  43.5 
 
 
221 aa  174  9.999999999999999e-43  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0266393 
 
 
-
 
NC_008726  Mvan_3504  response regulator receiver/unknown domain-containing protein  41.55 
 
 
221 aa  173  1.9999999999999998e-42  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0894605 
 
 
-
 
NC_013235  Namu_1040  response regulator receiver and unknown domain protein  39.09 
 
 
228 aa  169  4e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2020  response regulator receiver and unknown domain protein  39.46 
 
 
233 aa  167  8e-41  Pectobacterium wasabiae WPP163  Bacteria  normal  0.105388  n/a   
 
 
-
 
NC_012917  PC1_1748  response regulator receiver and unknown domain protein  39.46 
 
 
233 aa  167  1e-40  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.013924  n/a   
 
 
-
 
NC_008146  Mmcs_3239  response regulator receiver/unknown domain-containing protein  40.83 
 
 
220 aa  167  1e-40  Mycobacterium sp. MCS  Bacteria  normal  0.926137  n/a   
 
 
-
 
NC_008705  Mkms_3301  response regulator receiver/unknown domain-containing protein  40.83 
 
 
220 aa  167  1e-40  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0147948 
 
 
-
 
NC_009077  Mjls_3250  response regulator receiver/unknown domain-containing protein  40.83 
 
 
220 aa  167  1e-40  Mycobacterium sp. JLS  Bacteria  normal  0.237703  normal 
 
 
-
 
NC_012912  Dd1591_2326  response regulator receiver and unknown domain protein  40.09 
 
 
241 aa  166  2e-40  Dickeya zeae Ech1591  Bacteria  normal  0.500594  n/a   
 
 
-
 
NC_011772  BCG9842_B4345  response regulator  38.64 
 
 
225 aa  165  6.9999999999999995e-40  Bacillus cereus G9842  Bacteria  normal  0.158783  hitchhiker  0.00000000000467704 
 
 
-
 
NC_013757  Gobs_3623  response regulator receiver and unknown domain protein  40.81 
 
 
232 aa  164  8e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.796239  n/a   
 
 
-
 
NC_005957  BT9727_0838  response regulator  38.18 
 
 
225 aa  163  2.0000000000000002e-39  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.873813  n/a   
 
 
-
 
NC_012880  Dd703_2225  response regulator receiver and unknown domain protein  38.29 
 
 
241 aa  163  2.0000000000000002e-39  Dickeya dadantii Ech703  Bacteria  normal  0.381743  n/a   
 
 
-
 
CP001509  ECD_00590  DNA-binding response regulator in two-component regulatory system with citA  37.33 
 
 
226 aa  163  3e-39  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3005  response regulator receiver and unknown domain protein  37.33 
 
 
226 aa  163  3e-39  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0643  two-component response regulator DpiA  37.33 
 
 
226 aa  163  3e-39  Escherichia coli E24377A  Bacteria  normal  0.0236338  n/a   
 
 
-
 
NC_010468  EcolC_3024  two-component response regulator DpiA  37.33 
 
 
226 aa  163  3e-39  Escherichia coli ATCC 8739  Bacteria  normal  0.284092  normal 
 
 
-
 
NC_011353  ECH74115_0708  two-component response regulator DpiA  37.33 
 
 
226 aa  163  3e-39  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.767771  normal 
 
 
-
 
NC_010184  BcerKBAB4_0812  response regulator receiver  38.18 
 
 
225 aa  162  3e-39  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0639  two-component response regulator DpiA  37.33 
 
 
226 aa  163  3e-39  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0671  two-component response regulator DpiA  37.33 
 
 
226 aa  163  3e-39  Escherichia coli HS  Bacteria  hitchhiker  0.00334128  n/a   
 
 
-
 
NC_010658  SbBS512_E0535  two-component response regulator DpiA  37.33 
 
 
226 aa  163  3e-39  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00579  hypothetical protein  37.33 
 
 
226 aa  163  3e-39  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1376  response regulator receiver and unknown domain protein  38.81 
 
 
226 aa  161  7e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009436  Ent638_3379  response regulator receiver/unknown domain-containing protein  38.29 
 
 
230 aa  159  4e-38  Enterobacter sp. 638  Bacteria  normal  normal  0.440522 
 
 
-
 
NC_013595  Sros_8064  response regulator of citrate/malate metabolism  40.62 
 
 
224 aa  159  5e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1010  response regulator  37.27 
 
 
225 aa  158  6e-38  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1005  response regulator  36.82 
 
 
225 aa  158  6e-38  Bacillus cereus AH820  Bacteria  n/a    unclonable  1.38637e-62 
 
 
-
 
NC_011094  SeSA_A0785  two-component response regulator DpiA  36.99 
 
 
226 aa  158  6e-38  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.124053  normal  0.689385 
 
 
-
 
NC_011658  BCAH187_A1090  response regulator  36.82 
 
 
225 aa  158  6e-38  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0870  response regulator  37.73 
 
 
225 aa  158  7e-38  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0924  response regulator  37.73 
 
 
225 aa  158  7e-38  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1397  response regulator receiver/unknown domain-containing protein  39.82 
 
 
228 aa  158  7e-38  Arthrobacter sp. FB24  Bacteria  normal  0.362742  n/a   
 
 
-
 
NC_011080  SNSL254_A0681  two-component response regulator DpiA  36.99 
 
 
226 aa  158  7e-38  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0667  two-component response regulator DpiA  36.99 
 
 
226 aa  157  1e-37  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.182273  n/a   
 
 
-
 
NC_011083  SeHA_C0741  two-component response regulator DpiA  36.99 
 
 
226 aa  157  1e-37  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.21792  normal 
 
 
-
 
NC_011725  BCB4264_A0966  response regulator  37.73 
 
 
225 aa  157  1e-37  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3732  response regulator receiver/unknown domain-containing protein  37.5 
 
 
229 aa  156  2e-37  Serratia proteamaculans 568  Bacteria  normal  normal  0.655402 
 
 
-
 
NC_009654  Mmwyl1_2791  response regulator receiver/unknown domain-containing protein  35.27 
 
 
228 aa  155  6e-37  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00727267  normal 
 
 
-
 
NC_009438  Sputcn32_0349  response regulator receiver  38.64 
 
 
225 aa  154  1e-36  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0058  transcriptional regulatory protein CitB  36.07 
 
 
228 aa  153  2e-36  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.440261  normal 
 
 
-
 
NC_011083  SeHA_C0056  transcriptional regulator CitB  36.07 
 
 
228 aa  153  2e-36  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.993904  normal 
 
 
-
 
NC_011149  SeAg_B0059  transcriptional regulatory protein CitB  36.07 
 
 
228 aa  153  2e-36  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0057  transcriptional regulator CitB  36.07 
 
 
228 aa  153  2e-36  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.743375  normal  0.317361 
 
 
-
 
NC_011080  SNSL254_A0057  transcriptional regulator CitB  36.07 
 
 
228 aa  152  4e-36  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.651756 
 
 
-
 
NC_011886  Achl_0598  response regulator receiver and unknown domain protein  39.55 
 
 
223 aa  152  5e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00972259 
 
 
-
 
NC_011830  Dhaf_1239  response regulator receiver and unknown domain protein  38.91 
 
 
225 aa  152  5.9999999999999996e-36  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0291668  n/a   
 
 
-
 
NC_008025  Dgeo_0835  response regulator receiver/unknown domain-containing protein  38.29 
 
 
233 aa  150  1e-35  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.256612  normal  0.0817521 
 
 
-
 
NC_009674  Bcer98_0497  response regulator receiver  36 
 
 
235 aa  149  2e-35  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0354  response regulator receiver/unknown domain-containing protein  38.39 
 
 
217 aa  148  8e-35  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.435973 
 
 
-
 
NC_013093  Amir_3706  response regulator receiver and unknown domain protein  37.72 
 
 
226 aa  146  2.0000000000000003e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1163  response regulator receiver and unknown domain protein  38.99 
 
 
231 aa  144  1e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4644  response regulator receiver and unknown domain protein  34.96 
 
 
231 aa  144  1e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0210142  n/a   
 
 
-
 
NC_013131  Caci_5599  response regulator receiver and unknown domain protein  36.96 
 
 
243 aa  144  1e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0782544  normal  0.532525 
 
 
-
 
NC_013131  Caci_8199  response regulator receiver and unknown domain protein  36.32 
 
 
226 aa  144  2e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_1958  DNA-binding transcriptional activator DcuR  39.29 
 
 
237 aa  142  6e-33  Serratia proteamaculans 568  Bacteria  normal  normal  0.0209132 
 
 
-
 
NC_013124  Afer_0508  response regulator receiver and unknown domain protein  38.84 
 
 
224 aa  140  1.9999999999999998e-32  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.957096  n/a   
 
 
-
 
NC_013159  Svir_25720  response regulator of citrate/malate metabolism  37.44 
 
 
231 aa  139  3e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_03995  DNA-binding response regulator in two-component regulatory system with DcuS  34.56 
 
 
239 aa  139  3.9999999999999997e-32  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3868  response regulator receiver and unknown domain protein  34.56 
 
 
239 aa  139  3.9999999999999997e-32  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03956  hypothetical protein  34.56 
 
 
239 aa  139  3.9999999999999997e-32  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4591  DNA-binding transcriptional activator DcuR  34.56 
 
 
239 aa  139  3.9999999999999997e-32  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4678  DNA-binding transcriptional activator DcuR  34.56 
 
 
239 aa  139  3.9999999999999997e-32  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5638  DNA-binding transcriptional activator DcuR  34.56 
 
 
239 aa  139  3.9999999999999997e-32  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4365  DNA-binding transcriptional activator DcuR  34.56 
 
 
239 aa  139  3.9999999999999997e-32  Escherichia coli HS  Bacteria  normal  0.414132  n/a   
 
 
-
 
NC_010468  EcolC_3903  DNA-binding transcriptional activator DcuR  34.56 
 
 
239 aa  139  3.9999999999999997e-32  Escherichia coli ATCC 8739  Bacteria  normal  0.71711  normal 
 
 
-
 
NC_011772  BCG9842_B4724  response regulator  35.09 
 
 
235 aa  137  1e-31  Bacillus cereus G9842  Bacteria  normal  0.240866  normal 
 
 
-
 
NC_012917  PC1_0039  DNA-binding transcriptional activator DcuR  34.67 
 
 
240 aa  137  1e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4698  DNA-binding transcriptional activator DcuR  32.73 
 
 
239 aa  136  2e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4558  DNA-binding transcriptional activator DcuR  32.73 
 
 
239 aa  136  2e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4649  DNA-binding transcriptional activator DcuR  32.73 
 
 
239 aa  136  2e-31  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4649  DNA-binding transcriptional activator DcuR  32.73 
 
 
239 aa  136  2e-31  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.420528  normal  0.899721 
 
 
-
 
NC_011149  SeAg_B4566  DNA-binding transcriptional activator DcuR  32.73 
 
 
239 aa  136  2e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0491  response regulator receiver  34.22 
 
 
235 aa  136  2e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0615  response regulator  35.56 
 
 
235 aa  136  3.0000000000000003e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
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