9 homologs were found in PanDaTox collection
for query gene VC0395_A2608 on replicon NC_009457
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009457  VC0395_A2608  hypothetical protein  100 
 
 
319 aa  657    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0105  hypothetical protein  34.75 
 
 
325 aa  160  3e-38  Shewanella amazonensis SB2B  Bacteria  normal  unclonable  0.00001508 
 
 
-
 
NC_008740  Maqu_0781  WavE lipopolysaccharide synthesis  33.33 
 
 
343 aa  143  4e-33  Marinobacter aquaeolei VT8  Bacteria  normal  0.306369  n/a   
 
 
-
 
NC_009457  VC0395_A2609  hypothetical protein  32.18 
 
 
309 aa  123  4e-27  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0346  WavE lipopolysaccharide synthesis  28.44 
 
 
328 aa  100  3e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0554862  n/a   
 
 
-
 
NC_007005  Psyr_0619  WavE lipopolysaccharide synthesis  29.48 
 
 
347 aa  83.2  0.000000000000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.693869 
 
 
-
 
NC_004578  PSPTO_0713  hypothetical protein  27.98 
 
 
347 aa  73.2  0.000000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3893  hypothetical protein  25.46 
 
 
296 aa  61.2  0.00000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_4097  hypothetical protein  25.09 
 
 
296 aa  57.4  0.0000003  Shewanella sp. ANA-3  Bacteria  normal  normal  0.308715 
 
 
-
 
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