75 homologs were found in PanDaTox collection
for query gene VC0395_0330 on replicon NC_009456
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_0330  heme-binding protein HutZ  100 
 
 
176 aa  362  2e-99  Vibrio cholerae O395  Bacteria  normal  0.0843987  n/a   
 
 
-
 
NC_013457  VEA_001358  pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein  82.95 
 
 
176 aa  305  2.0000000000000002e-82  Vibrio sp. Ex25  Bacteria  normal  0.343115  n/a   
 
 
-
 
NC_009784  VIBHAR_05247  hypothetical protein  81.82 
 
 
176 aa  303  9.000000000000001e-82  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I1748  heme uptake and utilization protein HuvZ  69.19 
 
 
176 aa  254  3e-67  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3325  pyridoxamine 5'-phosphate oxidase-related FMN-binding  54.55 
 
 
189 aa  198  3e-50  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0502569  n/a   
 
 
-
 
NC_008309  HS_0722  heme binding protein  54.65 
 
 
173 aa  195  3e-49  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4002  pyridoxamine 5'-phosphate oxidase-related FMN-binding  51.76 
 
 
197 aa  189  2e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.285219 
 
 
-
 
NC_004347  SO_3667  hypothetical protein  49.7 
 
 
185 aa  187  8e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3233  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  49.7 
 
 
185 aa  186  1e-46  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0067733  normal  0.916764 
 
 
-
 
NC_009438  Sputcn32_0968  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  49.7 
 
 
185 aa  183  1.0000000000000001e-45  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3336  pyridoxamine 5'-phosphate oxidase-related FMN-binding  49.09 
 
 
185 aa  181  4.0000000000000006e-45  Shewanella baltica OS223  Bacteria  normal  0.195481  normal 
 
 
-
 
NC_009997  Sbal195_1056  pyridoxamine 5'-phosphate oxidase-related FMN-binding  49.09 
 
 
185 aa  181  5.0000000000000004e-45  Shewanella baltica OS195  Bacteria  normal  0.957646  normal 
 
 
-
 
NC_009665  Shew185_1023  pyridoxamine 5'-phosphate oxidase-related FMN-binding  49.09 
 
 
185 aa  181  5.0000000000000004e-45  Shewanella baltica OS185  Bacteria  normal  0.208688  n/a   
 
 
-
 
NC_007954  Sden_0792  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  48.52 
 
 
176 aa  179  1e-44  Shewanella denitrificans OS217  Bacteria  normal  0.0127904  n/a   
 
 
-
 
NC_009052  Sbal_0954  pyridoxamine 5'-phosphate oxidase-related FMN-binding  48.48 
 
 
185 aa  177  4.999999999999999e-44  Shewanella baltica OS155  Bacteria  normal  0.0302738  n/a   
 
 
-
 
NC_007413  Ava_2287  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  43.23 
 
 
165 aa  141  4e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  0.448208  normal 
 
 
-
 
NC_007520  Tcr_0178  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.34 
 
 
173 aa  108  5e-23  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1785  hypothetical protein  34.88 
 
 
251 aa  102  3e-21  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0671  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  34.75 
 
 
167 aa  101  5e-21  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1967  hypothetical protein  34.5 
 
 
247 aa  100  1e-20  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1600  hypothetical protein  34.3 
 
 
251 aa  100  1e-20  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0339  conserved hypothetical protein, pyridoxamine 5'-phosphate oxidase family  33.33 
 
 
168 aa  98.6  4e-20  Campylobacter lari RM2100  Bacteria  normal  0.988244  n/a   
 
 
-
 
NC_013517  Sterm_0587  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  35.86 
 
 
252 aa  97.4  1e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0929  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.01 
 
 
174 aa  96.3  2e-19  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0786  heme-utilization protein HutZ, putative  34.01 
 
 
173 aa  96.3  2e-19  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0652  pyridoxamine 5'-phosphate oxidase family protein  33.11 
 
 
283 aa  83.2  0.000000000000002  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.00637649  n/a   
 
 
-
 
NC_008599  CFF8240_1758  pyridoxamine 5'-phosphate oxidase family protein  31.58 
 
 
248 aa  80.9  0.000000000000009  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1064  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.25 
 
 
171 aa  69.3  0.00000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.29 
 
 
162 aa  65.5  0.0000000004  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.00418233  n/a   
 
 
-
 
NC_008781  Pnap_2042  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.32 
 
 
199 aa  63.9  0.000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0340627  normal 
 
 
-
 
NC_010002  Daci_4546  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.17 
 
 
194 aa  62.8  0.000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.158817  normal  0.600286 
 
 
-
 
NC_008228  Patl_1491  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.94 
 
 
244 aa  63.5  0.000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0688  hypothetical protein  30.41 
 
 
194 aa  63.2  0.000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.365581 
 
 
-
 
NC_012850  Rleg_3095  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.73 
 
 
249 aa  57.8  0.00000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3284  hypothetical protein  29.19 
 
 
243 aa  56.2  0.0000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0309  hypothetical protein  29.32 
 
 
238 aa  53.9  0.000001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1695  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.85 
 
 
167 aa  52.4  0.000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009036  Sbal_4453  hypothetical protein  37.35 
 
 
107 aa  52.4  0.000003  Shewanella baltica OS155  Bacteria  normal  normal  0.986317 
 
 
-
 
NC_009667  Oant_1581  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.12 
 
 
245 aa  52  0.000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0647071  n/a   
 
 
-
 
NC_008044  TM1040_2264  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.26 
 
 
171 aa  50.4  0.00001  Ruegeria sp. TM1040  Bacteria  normal  0.159731  normal 
 
 
-
 
NC_008254  Meso_2207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.94 
 
 
251 aa  50.1  0.00001  Chelativorans sp. BNC1  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_009439  Pmen_3685  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.3 
 
 
244 aa  49.7  0.00002  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2721  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.14 
 
 
171 aa  48.9  0.00004  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2826  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.09 
 
 
249 aa  48.5  0.00005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.171612  normal  0.204589 
 
 
-
 
NC_010501  PputW619_0965  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.01 
 
 
243 aa  48.1  0.00006  Pseudomonas putida W619  Bacteria  normal  0.499992  normal  0.821374 
 
 
-
 
NC_009767  Rcas_3461  pyridoxamine 5'-phosphate oxidase-related FMN-binding  23.65 
 
 
170 aa  47.4  0.0001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.00895829 
 
 
-
 
NC_007802  Jann_3613  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.36 
 
 
184 aa  47.4  0.0001  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.1 
 
 
243 aa  47  0.0001  Pseudomonas putida F1  Bacteria  normal  0.809108  normal  0.082398 
 
 
-
 
NC_011992  Dtpsy_1547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.71 
 
 
166 aa  47.4  0.0001  Acidovorax ebreus TPSY  Bacteria  normal  0.610229  n/a   
 
 
-
 
NC_008782  Ajs_2312  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.71 
 
 
166 aa  47.4  0.0001  Acidovorax sp. JS42  Bacteria  normal  normal  0.885603 
 
 
-
 
NC_012560  Avin_13440  pyridoxamine 5-phosphate oxidase  27.4 
 
 
245 aa  46.6  0.0002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_57040  hypothetical protein  28.06 
 
 
244 aa  45.8  0.0003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_1693  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.17 
 
 
148 aa  45.8  0.0003  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00000026689  n/a   
 
 
-
 
NC_011891  A2cp1_0907  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.88 
 
 
169 aa  45.4  0.0004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  unclonable  0.000000000620808  n/a   
 
 
-
 
NC_007778  RPB_0462  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.99 
 
 
244 aa  44.7  0.0006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.45404 
 
 
-
 
NC_009675  Anae109_0916  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.91 
 
 
172 aa  44.7  0.0007  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00374077  normal 
 
 
-
 
NC_010322  PputGB1_4491  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.05 
 
 
276 aa  44.7  0.0008  Pseudomonas putida GB-1  Bacteria  normal  0.0201918  normal 
 
 
-
 
NC_007355  Mbar_A3000  hypothetical protein  27.91 
 
 
146 aa  44.3  0.0009  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.225555  decreased coverage  0.000458503 
 
 
-
 
NC_010524  Lcho_3125  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.33 
 
 
156 aa  44.3  0.001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011004  Rpal_0362  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.47 
 
 
244 aa  43.9  0.001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.34488  n/a   
 
 
-
 
NC_009338  Mflv_1085  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.49 
 
 
276 aa  43.5  0.001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.429706  normal  0.50341 
 
 
-
 
NC_008146  Mmcs_0051  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  30.6 
 
 
169 aa  43.1  0.002  Mycobacterium sp. MCS  Bacteria  normal  0.158303  n/a   
 
 
-
 
NC_009077  Mjls_0041  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.6 
 
 
169 aa  43.1  0.002  Mycobacterium sp. JLS  Bacteria  normal  0.299884  normal  0.0534302 
 
 
-
 
NC_010511  M446_0224  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25 
 
 
260 aa  43.5  0.002  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.011733 
 
 
-
 
NC_008705  Mkms_0060  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.6 
 
 
169 aa  43.1  0.002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0501649 
 
 
-
 
NC_007492  Pfl01_4504  pyridoxamine 5'-phosphate oxidase-like, FMN-binding  27.21 
 
 
243 aa  42.4  0.003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  decreased coverage  0.000287779 
 
 
-
 
NC_007406  Nwi_0349  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.41 
 
 
245 aa  42.4  0.003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.334445  normal  0.250597 
 
 
-
 
NC_002947  PP_1358  hypothetical protein  28.38 
 
 
289 aa  42.4  0.003  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0010611  normal  0.192229 
 
 
-
 
NC_010505  Mrad2831_3090  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.68 
 
 
261 aa  42  0.004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.853398  normal 
 
 
-
 
NC_010655  Amuc_1262  pyridoxamine 5'-phosphate oxidase  35.21 
 
 
212 aa  41.6  0.006  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0581  hypothetical protein  25.93 
 
 
164 aa  41.2  0.007  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4959  hypothetical protein  27.34 
 
 
244 aa  40.8  0.01  Pseudomonas aeruginosa PA7  Bacteria  normal  0.112474  n/a   
 
 
-
 
NC_011894  Mnod_5432  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.28 
 
 
260 aa  40.8  0.01  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.932188  n/a   
 
 
-
 
NC_008726  Mvan_5737  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.5 
 
 
270 aa  40.8  0.01  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.602445 
 
 
-
 
NC_009952  Dshi_2212  hypothetical protein  28.17 
 
 
164 aa  40.8  0.01  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
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