More than 300 homologs were found in PanDaTox collection
for query gene Tpet_0288 on replicon NC_009486
Organism: Thermotoga petrophila RKU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009486  Tpet_0288  HAD family hydrolase  100 
 
 
203 aa  396  1e-109  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0287  HAD family hydrolase  89.16 
 
 
205 aa  361  4e-99  Thermotoga sp. RQ2  Bacteria  normal  0.146619  n/a   
 
 
-
 
NC_009616  Tmel_0900  HAD family hydrolase  48.7 
 
 
196 aa  196  1.0000000000000001e-49  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0412  HAD family hydrolase  49.5 
 
 
223 aa  195  4.0000000000000005e-49  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0976  HAD family hydrolase  42.78 
 
 
198 aa  147  1.0000000000000001e-34  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3671  HAD-superfamily hydrolase, subfamily IA, variant 3  41.41 
 
 
199 aa  137  1e-31  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00000000314321  n/a   
 
 
-
 
NC_012791  Vapar_1100  HAD-superfamily hydrolase, subfamily IA, variant 3  34.31 
 
 
219 aa  124  1e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000290  HAD superfamily hydrolase  32.98 
 
 
205 aa  115  3e-25  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1128  HAD family hydrolase  33.84 
 
 
214 aa  114  1.0000000000000001e-24  Rhodoferax ferrireducens T118  Bacteria  normal  0.893823  n/a   
 
 
-
 
NC_010644  Emin_0468  HAD family hydrolase  33.33 
 
 
202 aa  110  1.0000000000000001e-23  Elusimicrobium minutum Pei191  Bacteria  normal  0.85334  hitchhiker  0.00430907 
 
 
-
 
NC_009784  VIBHAR_06091  hypothetical protein  32.28 
 
 
205 aa  109  3e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1251  HAD family phosphatase  30.77 
 
 
202 aa  107  2e-22  Vibrio cholerae O395  Bacteria  hitchhiker  0.000890892  n/a   
 
 
-
 
NC_008530  LGAS_0945  HAD superfamily hydrolase  34.57 
 
 
199 aa  97.1  2e-19  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000164408  normal 
 
 
-
 
NC_014150  Bmur_1926  HAD-superfamily hydrolase, subfamily IA, variant 3  30 
 
 
201 aa  96.3  3e-19  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0542  HAD family hydrolase  30 
 
 
219 aa  95.9  4e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.0173803  normal  0.811025 
 
 
-
 
NC_008044  TM1040_2669  HAD family hydrolase  33.87 
 
 
206 aa  91.7  7e-18  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3384  HAD family hydrolase  30.24 
 
 
206 aa  90.9  1e-17  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_2236  HAD-superfamily hydrolase, subfamily IA, variant 3  31.79 
 
 
214 aa  88.2  7e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1967  putative HAD superfamily hydrolase  26.67 
 
 
234 aa  86.7  2e-16  Bifidobacterium longum DJO10A  Bacteria  normal  0.0600927  n/a   
 
 
-
 
NC_008825  Mpe_A3093  hypothetical protein  29.56 
 
 
209 aa  85.9  4e-16  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.368672 
 
 
-
 
NC_011369  Rleg2_0651  HAD-superfamily hydrolase, subfamily IA, variant 3  27.5 
 
 
205 aa  85.5  5e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.286753 
 
 
-
 
NC_008686  Pden_0043  HAD family hydrolase  31.53 
 
 
200 aa  85.1  6e-16  Paracoccus denitrificans PD1222  Bacteria  normal  0.237358  normal 
 
 
-
 
NC_007951  Bxe_A0441  putative L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase)  32.21 
 
 
207 aa  84.3  0.000000000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.238349  normal 
 
 
-
 
NC_007802  Jann_0053  HAD family hydrolase  28.57 
 
 
207 aa  83.6  0.000000000000002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0492  HAD superfamily hydrolase  26.47 
 
 
205 aa  82.4  0.000000000000004  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0706  HAD-superfamily hydrolase, subfamily IA, variant 3  26.11 
 
 
204 aa  81.6  0.000000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.182073  normal 
 
 
-
 
NC_009505  BOV_0496  HAD superfamily hydrolase  25.98 
 
 
205 aa  81.3  0.000000000000009  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3517  HAD-superfamily hydrolase, subfamily IA, variant 3  31.73 
 
 
207 aa  80.1  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00913759  normal  0.088603 
 
 
-
 
NC_009667  Oant_0606  HAD family hydrolase  28.29 
 
 
204 aa  80.1  0.00000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.49461  n/a   
 
 
-
 
NC_012669  Bcav_2047  HAD-superfamily hydrolase, subfamily IA, variant 3  24.5 
 
 
211 aa  78.6  0.00000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.044759 
 
 
-
 
NC_009719  Plav_2026  HAD family hydrolase  32.62 
 
 
203 aa  78.2  0.00000000000007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.151114  normal  0.583157 
 
 
-
 
NC_010816  BLD_0524  putative HAD superfamily hydrolase  28.77 
 
 
209 aa  77.8  0.0000000000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.172538  n/a   
 
 
-
 
NC_008699  Noca_0887  HAD family hydrolase  28.43 
 
 
206 aa  77.4  0.0000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_18080  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  25.91 
 
 
211 aa  77  0.0000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.588171  normal  0.386622 
 
 
-
 
NC_013530  Xcel_1720  HAD-superfamily hydrolase, subfamily IA, variant 3  27.45 
 
 
209 aa  77  0.0000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  hitchhiker  0.00306678  n/a   
 
 
-
 
NC_011989  Avi_1090  hydrolase  26.37 
 
 
202 aa  74.7  0.0000000000008  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2715  HAD family hydrolase  27.27 
 
 
207 aa  74.7  0.0000000000008  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5618  HAD-superfamily hydrolase, subfamily IA, variant 3  27.88 
 
 
211 aa  73.9  0.000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0848  HAD hydrolase, family IA, variant 3  28.65 
 
 
216 aa  71.2  0.000000000009  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008048  Sala_2997  HAD family hydrolase  26.83 
 
 
203 aa  71.2  0.00000000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.155804 
 
 
-
 
NC_008255  CHU_0909  haloacid dehalogenase-like hydrolase  27.4 
 
 
211 aa  70.1  0.00000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.538395  normal  0.573349 
 
 
-
 
NC_010551  BamMC406_0446  HAD family hydrolase  28.08 
 
 
207 aa  69.3  0.00000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.230544 
 
 
-
 
NC_009943  Dole_0571  HAD family hydrolase  24.62 
 
 
203 aa  69.7  0.00000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2925  HAD-superfamily hydrolase  28.29 
 
 
207 aa  68.2  0.00000000008  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0420  HAD family hydrolase  28.43 
 
 
207 aa  68.2  0.00000000008  Burkholderia ambifaria AMMD  Bacteria  normal  0.802184  n/a   
 
 
-
 
NC_006349  BMAA0509  HAD-superfamily hydrolase  29.9 
 
 
207 aa  68.2  0.00000000009  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3596  hydrolase  29.9 
 
 
207 aa  68.2  0.00000000009  Burkholderia pseudomallei 1710b  Bacteria  normal  0.623468  n/a   
 
 
-
 
NC_009079  BMA10247_A1935  HAD family hydrolase  29.9 
 
 
207 aa  68.2  0.00000000009  Burkholderia mallei NCTC 10247  Bacteria  normal  0.729707  n/a   
 
 
-
 
NC_009076  BURPS1106A_3607  HAD family hydrolase  29.9 
 
 
207 aa  68.2  0.00000000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3582  HAD family hydrolase  29.9 
 
 
207 aa  68.2  0.00000000009  Burkholderia pseudomallei 668  Bacteria  normal  0.548756  n/a   
 
 
-
 
NC_008784  BMASAVP1_0669  HAD family hydrolase  29.9 
 
 
207 aa  68.2  0.00000000009  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0965  HAD family hydrolase  29.9 
 
 
207 aa  68.2  0.00000000009  Burkholderia mallei NCTC 10229  Bacteria  normal  0.171916  n/a   
 
 
-
 
NC_013132  Cpin_0647  HAD-superfamily hydrolase, subfamily IA, variant 3  26.37 
 
 
204 aa  67.4  0.0000000001  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000028477  normal  0.274345 
 
 
-
 
NC_010508  Bcenmc03_0488  HAD family hydrolase  29.9 
 
 
207 aa  67.4  0.0000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2208  HAD-superfamily hydrolase, subfamily IA, variant 3  29.08 
 
 
204 aa  67.4  0.0000000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008060  Bcen_2588  HAD family hydrolase  29.9 
 
 
207 aa  67.8  0.0000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2528  HAD family hydrolase  29.35 
 
 
204 aa  67.8  0.0000000001  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0516  HAD family hydrolase  29.9 
 
 
207 aa  67.8  0.0000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.374792  n/a   
 
 
-
 
NC_002950  PG0725  HAD superfamily hydrolase  29.53 
 
 
208 aa  66.6  0.0000000002  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_010084  Bmul_2882  HAD family hydrolase  29.27 
 
 
207 aa  66.6  0.0000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0448644  normal  0.225863 
 
 
-
 
NC_007510  Bcep18194_A3603  HAD family hydrolase  28.92 
 
 
207 aa  65.9  0.0000000005  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0784  HAD-superfamily hydrolase  30.2 
 
 
216 aa  65.1  0.0000000007  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4490  putative haloacid dehalogenase-like hydrolase  27.32 
 
 
209 aa  64.7  0.0000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2434  HAD-superfamily hydrolase, subfamily IA, variant 3  33 
 
 
298 aa  64.3  0.000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2594  hydrolase  28.26 
 
 
209 aa  63.9  0.000000001  Agrobacterium vitis S4  Bacteria  normal  0.537934  n/a   
 
 
-
 
NC_013730  Slin_2711  HAD-superfamily hydrolase, subfamily IA, variant 3  28.43 
 
 
217 aa  63.9  0.000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2835  HAD family hydrolase  25.5 
 
 
231 aa  63.9  0.000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.160416  normal 
 
 
-
 
NC_008254  Meso_0764  HAD family hydrolase  29.35 
 
 
203 aa  64.7  0.000000001  Chelativorans sp. BNC1  Bacteria  normal  0.523693  n/a   
 
 
-
 
NC_008254  Meso_2325  HAD family hydrolase  28.57 
 
 
199 aa  64.3  0.000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3116  HAD family hydrolase  29.89 
 
 
193 aa  64.7  0.000000001  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.441667 
 
 
-
 
NC_007333  Tfu_2484  HAD family hydrolase  33.9 
 
 
218 aa  62  0.000000005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3244  HAD-superfamily hydrolase, subfamily IA, variant 3  26.56 
 
 
208 aa  62  0.000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1828  HAD-superfamily hydrolase, subfamily IA, variant 3  28.92 
 
 
211 aa  62  0.000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.978388 
 
 
-
 
NC_013162  Coch_0670  beta-phosphoglucomutase  24.51 
 
 
207 aa  61.6  0.000000007  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.922957  n/a   
 
 
-
 
NC_013159  Svir_38090  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  25.76 
 
 
194 aa  61.6  0.000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.516929  normal 
 
 
-
 
NC_007355  Mbar_A0742  beta-phosphoglucomutase  28.49 
 
 
214 aa  61.2  0.00000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007492  Pfl01_1752  HAD family hydrolase  26.73 
 
 
232 aa  60.8  0.00000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2037  putative haloacid dehalogenase-like hydrolase  28 
 
 
203 aa  61.2  0.00000001  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1742  Haloacid dehalogenase domain protein hydrolase  29.41 
 
 
204 aa  60.8  0.00000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0641396  n/a   
 
 
-
 
NC_014210  Ndas_3728  HAD-superfamily hydrolase, subfamily IA, variant 3  34.69 
 
 
224 aa  60.1  0.00000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.93668  normal 
 
 
-
 
NC_014230  CA2559_12718  putative haloacid dehalogenase-like hydrolase  36.05 
 
 
203 aa  60.1  0.00000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2884  Haloacid dehalogenase domain protein hydrolase  27.86 
 
 
202 aa  60.5  0.00000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_3272  HAD family hydrolase  23.46 
 
 
207 aa  60.5  0.00000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2805  HAD family hydrolase  25.74 
 
 
208 aa  59.3  0.00000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.187459 
 
 
-
 
NC_010003  Pmob_0452  HAD family hydrolase  26.13 
 
 
221 aa  59.7  0.00000003  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4958  hydrolase  24.62 
 
 
201 aa  59.3  0.00000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.158078  normal  0.959815 
 
 
-
 
NC_004578  PSPTO_0708  HAD-superfamily hydrolase  24.51 
 
 
212 aa  58.5  0.00000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0096  HAD superfamily hydrolase  25.85 
 
 
207 aa  58.5  0.00000007  Lactococcus lactis subsp. cremoris SK11  Bacteria  unclonable  0.0000147851  n/a   
 
 
-
 
NC_009441  Fjoh_0002  HAD family hydrolase  32.98 
 
 
200 aa  58.2  0.00000009  Flavobacterium johnsoniae UW101  Bacteria  normal  0.142779  n/a   
 
 
-
 
NC_008025  Dgeo_1288  HAD family hydrolase  27.57 
 
 
212 aa  57.8  0.0000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.888389  normal 
 
 
-
 
NC_013093  Amir_3459  HAD-superfamily hydrolase, subfamily IA, variant 3  26.32 
 
 
216 aa  57.4  0.0000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0792688  n/a   
 
 
-
 
NC_009441  Fjoh_0350  HAD family hydrolase  27.18 
 
 
208 aa  57  0.0000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.373549  n/a   
 
 
-
 
NC_013457  VEA_000204  putative phosphatase YieH  27.6 
 
 
222 aa  57.4  0.0000002  Vibrio sp. Ex25  Bacteria  normal  0.30106  n/a   
 
 
-
 
NC_008009  Acid345_0142  HAD family hydrolase  25.3 
 
 
212 aa  56.6  0.0000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  hitchhiker  0.0023385 
 
 
-
 
NC_011369  Rleg2_4259  HAD-superfamily hydrolase, subfamily IA, variant 3  38.24 
 
 
203 aa  56.6  0.0000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0101  HAD-superfamily hydrolase, subfamily IA, variant 3  25 
 
 
218 aa  56.6  0.0000002  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.00251058  n/a   
 
 
-
 
NC_013510  Tcur_3350  HAD-superfamily hydrolase, subfamily IA, variant 3  27.36 
 
 
205 aa  56.2  0.0000003  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00377718  n/a   
 
 
-
 
NC_011368  Rleg2_4436  HAD-superfamily hydrolase, subfamily IA, variant 3  27.33 
 
 
216 aa  55.8  0.0000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00258568  normal 
 
 
-
 
NC_013061  Phep_1518  HAD-superfamily hydrolase, subfamily IA, variant 3  23.92 
 
 
216 aa  55.8  0.0000004  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.801994 
 
 
-
 
NC_010658  SbBS512_E4363  phosphatase  24.12 
 
 
199 aa  55.8  0.0000004  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
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