10 homologs were found in PanDaTox collection
for query gene Tpau_3905 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_3905  hypothetical protein  100 
 
 
54 aa  110  5e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13686  hypothetical protein  68.09 
 
 
68 aa  63.2  0.000000001  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  5.34573e-46  normal  0.1222 
 
 
-
 
NC_008146  Mmcs_4802  hypothetical protein  63.64 
 
 
68 aa  61.2  0.000000005  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4888  hypothetical protein  63.64 
 
 
68 aa  61.2  0.000000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0634451 
 
 
-
 
NC_009077  Mjls_5189  hypothetical protein  63.64 
 
 
68 aa  61.2  0.000000005  Mycobacterium sp. JLS  Bacteria  normal  0.221064  decreased coverage  0.0000618918 
 
 
-
 
NC_008726  Mvan_5404  hypothetical protein  65.12 
 
 
66 aa  60.8  0.000000006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.175529 
 
 
-
 
NC_013757  Gobs_0595  hypothetical protein  56.52 
 
 
89 aa  46.2  0.0001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0316  hypothetical protein  54.55 
 
 
90 aa  43.1  0.001  Frankia sp. EAN1pec  Bacteria  normal  0.201172  normal  0.338684 
 
 
-
 
NC_013131  Caci_0049  hypothetical protein  54.55 
 
 
58 aa  42  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.92446  normal 
 
 
-
 
NC_014165  Tbis_0217  hypothetical protein  54.55 
 
 
75 aa  40.8  0.007  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
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