More than 300 homologs were found in PanDaTox collection
for query gene Tpau_3538 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_3538  phosphate uptake regulator, PhoU  100 
 
 
220 aa  447  1e-125  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1665  phosphate uptake regulator, PhoU  73.97 
 
 
222 aa  332  3e-90  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10836  phosphate-transport system transcriptional regulatory protein phoY2  73.81 
 
 
213 aa  326  2.0000000000000001e-88  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00142472 
 
 
-
 
NC_008146  Mmcs_4514  phosphate uptake regulator, PhoU  73.85 
 
 
222 aa  326  2.0000000000000001e-88  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4897  phosphate uptake regulator, PhoU  73.85 
 
 
222 aa  326  2.0000000000000001e-88  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_4601  phosphate uptake regulator, PhoU  73.85 
 
 
222 aa  326  2.0000000000000001e-88  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3921  phosphate transport system regulatory protein PhoU  75.83 
 
 
220 aa  325  5e-88  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5088  phosphate uptake regulator, PhoU  74.43 
 
 
222 aa  320  9.999999999999999e-87  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13330  phosphate-transport system transcriptional regulatory protein phoY1  55.76 
 
 
221 aa  261  4.999999999999999e-69  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6815  phosphate uptake regulator, PhoU  56.87 
 
 
220 aa  241  6e-63  Actinosynnema mirum DSM 43827  Bacteria  normal  0.289636  n/a   
 
 
-
 
NC_013159  Svir_37610  phosphate uptake regulator, PhoU  51.89 
 
 
220 aa  221  4.9999999999999996e-57  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.141412 
 
 
-
 
NC_007777  Francci3_0469  phosphate uptake regulator, PhoU  48.58 
 
 
215 aa  210  1e-53  Frankia sp. CcI3  Bacteria  normal  normal  0.741402 
 
 
-
 
NC_009921  Franean1_6147  phosphate uptake regulator, PhoU  48.1 
 
 
214 aa  207  9e-53  Frankia sp. EAN1pec  Bacteria  normal  0.557412  normal 
 
 
-
 
NC_013131  Caci_8217  phosphate uptake regulator, PhoU  46.98 
 
 
217 aa  203  2e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.864865  normal 
 
 
-
 
NC_013757  Gobs_4604  phosphate uptake regulator, PhoU  47.42 
 
 
219 aa  191  6e-48  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0959  phosphate uptake regulator, PhoU  44.95 
 
 
219 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0698  phosphate uptake regulator, PhoU  45.02 
 
 
217 aa  187  9e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3448  phosphate uptake regulator, PhoU  43.81 
 
 
230 aa  184  1.0000000000000001e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.741283  normal 
 
 
-
 
NC_009664  Krad_0894  phosphate uptake regulator, PhoU  45.54 
 
 
221 aa  184  1.0000000000000001e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.106658  hitchhiker  0.000480176 
 
 
-
 
NC_013235  Namu_4977  phosphate uptake regulator, PhoU  49.05 
 
 
225 aa  176  2e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4320  phosphate uptake regulator, PhoU  41.43 
 
 
220 aa  175  6e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4044  phosphate uptake regulator, PhoU  43.81 
 
 
238 aa  175  6e-43  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3204  phosphate uptake regulator, PhoU  47.39 
 
 
234 aa  170  2e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0090  phosphate uptake regulator, PhoU  43.13 
 
 
220 aa  166  2e-40  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0497  phosphate uptake regulator, PhoU  46.45 
 
 
218 aa  162  5.0000000000000005e-39  Thermobispora bispora DSM 43833  Bacteria  normal  0.839068  normal 
 
 
-
 
NC_014151  Cfla_0655  phosphate uptake regulator, PhoU  41.71 
 
 
224 aa  156  3e-37  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0834345  hitchhiker  0.000018178 
 
 
-
 
NC_013521  Sked_31900  phosphate uptake regulator, PhoU  42.18 
 
 
223 aa  153  2e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2971  phosphate uptake regulator, PhoU  41.55 
 
 
219 aa  152  2.9999999999999998e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0848  phosphate uptake regulator, PhoU  37.04 
 
 
220 aa  149  3e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013169  Ksed_03680  phosphate transport system regulatory protein PhoU  41.01 
 
 
226 aa  145  4.0000000000000006e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.199787 
 
 
-
 
NC_013174  Jden_2085  phosphate uptake regulator, PhoU  36.97 
 
 
222 aa  145  4.0000000000000006e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  0.252335  normal 
 
 
-
 
NC_012669  Bcav_0769  phosphate uptake regulator, PhoU  40.37 
 
 
232 aa  140  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.178103  normal  0.488528 
 
 
-
 
NC_008541  Arth_0722  phosphate uptake regulator, PhoU  35.05 
 
 
220 aa  138  6e-32  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2908  phosphate uptake regulator, PhoU  40.48 
 
 
231 aa  130  2.0000000000000002e-29  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1780  phosphate uptake regulator  37.27 
 
 
224 aa  129  3e-29  Bifidobacterium longum DJO10A  Bacteria  normal  0.210752  n/a   
 
 
-
 
NC_009380  Strop_0285  phosphate uptake regulator, PhoU  37.91 
 
 
214 aa  129  5.0000000000000004e-29  Salinispora tropica CNB-440  Bacteria  normal  0.376291  normal  0.13988 
 
 
-
 
NC_013172  Bfae_09310  phosphate transport system regulatory protein PhoU  36.11 
 
 
226 aa  123  2e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0329  phosphate uptake regulator, PhoU  38.39 
 
 
214 aa  122  4e-27  Salinispora arenicola CNS-205  Bacteria  normal  0.0770036  hitchhiker  0.00020327 
 
 
-
 
NC_013721  HMPREF0424_0395  phosphate transport system regulatory protein PhoU  32.88 
 
 
226 aa  120  9.999999999999999e-27  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_2218  phosphate uptake regulator, PhoU  35.24 
 
 
216 aa  119  3e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0150232 
 
 
-
 
NC_012803  Mlut_03730  phosphate uptake regulator, PhoU  37.62 
 
 
222 aa  117  9.999999999999999e-26  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0356664  n/a   
 
 
-
 
NC_008554  Sfum_2889  phosphate uptake regulator, PhoU  29.72 
 
 
218 aa  101  1e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.114573 
 
 
-
 
NC_008554  Sfum_2904  phosphate uptake regulator, PhoU  29.72 
 
 
218 aa  101  1e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.18358  normal  0.0218976 
 
 
-
 
NC_011661  Dtur_0478  phosphate uptake regulator, PhoU  26.76 
 
 
218 aa  97.4  1e-19  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0351  phosphate uptake regulator, PhoU  30.05 
 
 
233 aa  96.3  3e-19  Methanococcus maripaludis C7  Archaea  normal  hitchhiker  0.00165088 
 
 
-
 
NC_009012  Cthe_1601  phosphate uptake regulator, PhoU  29.8 
 
 
216 aa  94.4  1e-18  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.000531756  n/a   
 
 
-
 
NC_009135  MmarC5_0485  phosphate uptake regulator, PhoU  28.77 
 
 
233 aa  93.6  2e-18  Methanococcus maripaludis C5  Archaea  normal  0.89743  n/a   
 
 
-
 
NC_011126  HY04AAS1_0012  phosphate uptake regulator, PhoU  31.22 
 
 
220 aa  91.3  9e-18  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000000000224503  n/a   
 
 
-
 
NC_010001  Cphy_2830  phosphate uptake regulator, PhoU  26.42 
 
 
220 aa  90.1  2e-17  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0571  phosphate uptake regulator, PhoU  29.91 
 
 
217 aa  89.4  4e-17  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000468215  n/a   
 
 
-
 
NC_013216  Dtox_1080  phosphate uptake regulator, PhoU  30.48 
 
 
219 aa  88.6  6e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0158991  normal 
 
 
-
 
NC_010424  Daud_1415  phosphate uptake regulator, PhoU  31.02 
 
 
218 aa  88.6  7e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00000133646  n/a   
 
 
-
 
NC_008532  STER_1011  phosphate uptake regulatory protein  29.44 
 
 
218 aa  87.8  1e-16  Streptococcus thermophilus LMD-9  Bacteria  normal  0.158059  n/a   
 
 
-
 
NC_011898  Ccel_2105  phosphate uptake regulator, PhoU  25.23 
 
 
221 aa  87  2e-16  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3367  phosphate uptake regulator, PhoU  34.24 
 
 
222 aa  86.3  3e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.812855 
 
 
-
 
NC_011365  Gdia_3273  phosphate uptake regulator, PhoU  33.16 
 
 
233 aa  85.9  4e-16  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0870914  normal 
 
 
-
 
NC_014150  Bmur_2837  phosphate uptake regulator, PhoU  25.67 
 
 
214 aa  85.5  5e-16  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1238  phosphate uptake regulator, PhoU  28.91 
 
 
219 aa  84.7  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.17919  n/a   
 
 
-
 
NC_008553  Mthe_0621  phosphate uptake regulator, PhoU  28.04 
 
 
226 aa  84.3  0.000000000000001  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0424  phosphate uptake regulator, PhoU  28.24 
 
 
228 aa  83.6  0.000000000000002  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008554  Sfum_0700  phosphate uptake regulator, PhoU  27.83 
 
 
219 aa  83.6  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.977876 
 
 
-
 
NC_007512  Plut_1241  hypothetical protein  31.13 
 
 
228 aa  83.2  0.000000000000003  Chlorobium luteolum DSM 273  Bacteria  normal  0.375245  normal  0.531566 
 
 
-
 
NC_008639  Cpha266_1042  phosphate uptake regulator, PhoU  34.97 
 
 
228 aa  83.2  0.000000000000003  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00000260045  n/a   
 
 
-
 
NC_010003  Pmob_1928  phosphate uptake regulator, PhoU  27.66 
 
 
220 aa  82.8  0.000000000000004  Petrotoga mobilis SJ95  Bacteria  normal  0.0636497  n/a   
 
 
-
 
NC_010001  Cphy_1671  phosphate uptake regulator, PhoU  28.49 
 
 
217 aa  82.4  0.000000000000005  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000164191  n/a   
 
 
-
 
NC_013922  Nmag_0489  phosphate uptake regulator, PhoU  28.26 
 
 
223 aa  82.4  0.000000000000005  Natrialba magadii ATCC 43099  Archaea  normal  0.762813  n/a   
 
 
-
 
NC_008261  CPF_0622  phosphate transport system regulatory protein PhoU  27.6 
 
 
217 aa  82  0.000000000000007  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.00632575  n/a   
 
 
-
 
NC_008262  CPR_0608  phosphate transport system regulatory protein PhoU  27.6 
 
 
217 aa  81.6  0.000000000000007  Clostridium perfringens SM101  Bacteria  hitchhiker  0.00182216  n/a   
 
 
-
 
NC_009975  MmarC6_1568  phosphate uptake regulator, PhoU  27.7 
 
 
233 aa  81.6  0.000000000000008  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0573  phosphate uptake regulator, PhoU  25.69 
 
 
224 aa  81.3  0.000000000000009  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009484  Acry_2950  phosphate uptake regulator, PhoU  28 
 
 
239 aa  81.3  0.00000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0839  phosphate uptake regulator, PhoU  32.14 
 
 
220 aa  81.3  0.00000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0380  phosphate uptake regulator, PhoU  32.24 
 
 
218 aa  81.3  0.00000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1616  phosphate uptake regulator, PhoU  32.97 
 
 
228 aa  81.3  0.00000000000001  Chlorobium limicola DSM 245  Bacteria  normal  0.46313  n/a   
 
 
-
 
NC_008530  LGAS_0552  phosphate uptake regulator  28.72 
 
 
227 aa  80.9  0.00000000000001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  1.5092700000000001e-19 
 
 
-
 
NC_011060  Ppha_1678  phosphate uptake regulator, PhoU  34.81 
 
 
219 aa  80.5  0.00000000000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  decreased coverage  0.00615654  n/a   
 
 
-
 
NC_013205  Aaci_1906  phosphate uptake regulator, PhoU  32.62 
 
 
218 aa  80.1  0.00000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2484  phosphate uptake regulator, PhoU  29.26 
 
 
223 aa  80.1  0.00000000000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011146  Gbem_1863  phosphate uptake regulator, PhoU  27.23 
 
 
227 aa  80.1  0.00000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1482  phosphate uptake regulator, PhoU  26.2 
 
 
225 aa  80.5  0.00000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.12558  n/a   
 
 
-
 
NC_009487  SaurJH9_1446  phosphate uptake regulator, PhoU  27.83 
 
 
213 aa  79.7  0.00000000000003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3576  phosphate uptake regulator, PhoU  28.23 
 
 
232 aa  79.7  0.00000000000003  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.47067 
 
 
-
 
NC_009632  SaurJH1_1475  phosphate transport system regulatory protein PhoU  27.83 
 
 
213 aa  79.7  0.00000000000003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.632881  n/a   
 
 
-
 
NC_014148  Plim_1486  phosphate transport system regulatory protein PhoU  29.08 
 
 
224 aa  79.7  0.00000000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.130643  n/a   
 
 
-
 
NC_009253  Dred_0710  phosphate uptake regulator, PhoU  30.98 
 
 
218 aa  79  0.00000000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0228  phosphate uptake regulator, PhoU  29.61 
 
 
221 aa  79  0.00000000000006  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2687  phosphate uptake regulator, PhoU  28.7 
 
 
231 aa  79  0.00000000000006  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0840581  normal  0.852923 
 
 
-
 
NC_008009  Acid345_2971  phosphate uptake regulator, PhoU  29.11 
 
 
222 aa  79  0.00000000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_150  phosphate transport system regulatory protein  28.44 
 
 
221 aa  78.6  0.00000000000008  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0142  phosphate transport system regulatory protein PhoU  28.31 
 
 
221 aa  77.8  0.0000000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4118  phosphate uptake regulator, PhoU  27.36 
 
 
233 aa  77.8  0.0000000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1782  phosphate uptake regulator, PhoU  27.96 
 
 
216 aa  77.4  0.0000000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010320  Teth514_1991  phosphate uptake regulator, PhoU  29.63 
 
 
217 aa  77  0.0000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0422  phosphate uptake regulator, PhoU  28.97 
 
 
231 aa  77.4  0.0000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.980511 
 
 
-
 
NC_007794  Saro_2280  phosphate uptake regulator, PhoU  28.9 
 
 
228 aa  76.3  0.0000000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0285843  n/a   
 
 
-
 
NC_010831  Cphamn1_1237  phosphate uptake regulator, PhoU  30.46 
 
 
228 aa  76.3  0.0000000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.316585  normal  0.224996 
 
 
-
 
NC_007954  Sden_2581  transcriptional regulator PhoU  26.92 
 
 
236 aa  76.3  0.0000000000004  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0822  phosphate uptake regulator, PhoU  26.19 
 
 
240 aa  75.9  0.0000000000004  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.591011  hitchhiker  0.00503775 
 
 
-
 
NC_011146  Gbem_1848  phosphate uptake regulator, PhoU  29.23 
 
 
223 aa  76.3  0.0000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4144  phosphate uptake regulator, PhoU  26.54 
 
 
233 aa  75.9  0.0000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
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