37 homologs were found in PanDaTox collection
for query gene Tpau_2176 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_2176  PPOX class putative F420-dependent enzyme  100 
 
 
132 aa  264  2.9999999999999995e-70  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.099201  n/a   
 
 
-
 
NC_008726  Mvan_3436  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  62.7 
 
 
137 aa  162  1.0000000000000001e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.876254  normal 
 
 
-
 
NC_009338  Mflv_3099  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  62.1 
 
 
130 aa  159  1e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.067273  normal  0.208498 
 
 
-
 
NC_009565  TBFG_12110  hypothetical protein  59.52 
 
 
137 aa  155  1e-37  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00852245  normal 
 
 
-
 
NC_013521  Sked_22670  Pyridoxamine 5'-phosphate oxidase  61.42 
 
 
135 aa  152  2e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.530316  normal  0.229215 
 
 
-
 
NC_013235  Namu_1449  pyridoxamine 5'-phosphate oxidase-related FMN- binding  60.63 
 
 
135 aa  145  2.0000000000000003e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.45335 
 
 
-
 
NC_013441  Gbro_2474  PPOX class putative F420-dependent enzyme  65.32 
 
 
140 aa  142  2e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1422  pyridoxamine 5'-phosphate oxidase-related FMN-binding  57.38 
 
 
133 aa  137  3e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0834851  normal  0.710342 
 
 
-
 
NC_008705  Mkms_2526  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  60.32 
 
 
141 aa  137  6e-32  Mycobacterium sp. KMS  Bacteria  normal  0.247468  normal  0.640115 
 
 
-
 
NC_013757  Gobs_4279  PPOX class putative F420-dependent enzyme  62.39 
 
 
130 aa  134  3.0000000000000003e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.52352  n/a   
 
 
-
 
NC_013131  Caci_3343  pyridoxamine 5'-phosphate oxidase-related FMN- binding  54.26 
 
 
139 aa  131  3e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0628718  normal  0.731519 
 
 
-
 
NC_013093  Amir_1777  pyridoxamine 5'-phosphate oxidase-related FMN- binding  54.47 
 
 
130 aa  122  1e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.364078  n/a   
 
 
-
 
NC_014165  Tbis_2503  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  53.97 
 
 
128 aa  121  3e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.25394 
 
 
-
 
NC_008699  Noca_0878  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  51.2 
 
 
132 aa  117  4.9999999999999996e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1795  putative F420-dependent enzyme  52.34 
 
 
128 aa  115  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0896007  normal  0.545256 
 
 
-
 
NC_013595  Sros_7957  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  53.66 
 
 
131 aa  115  1.9999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1242  Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase  51.67 
 
 
404 aa  114  5e-25  Frankia sp. CcI3  Bacteria  normal  normal  0.194401 
 
 
-
 
NC_008146  Mmcs_2481  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  59.26 
 
 
115 aa  113  7.999999999999999e-25  Mycobacterium sp. MCS  Bacteria  normal  0.282681  n/a   
 
 
-
 
NC_009077  Mjls_2518  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  59.26 
 
 
115 aa  113  7.999999999999999e-25  Mycobacterium sp. JLS  Bacteria  normal  0.136423  normal  0.885746 
 
 
-
 
NC_013174  Jden_1087  pyridoxamine 5'-phosphate oxidase-related FMN- binding  55.08 
 
 
136 aa  102  1e-21  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0652825  normal 
 
 
-
 
NC_013595  Sros_5600  hypothetical protein  50.88 
 
 
142 aa  102  2e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0719975  normal  0.397912 
 
 
-
 
NC_013131  Caci_6470  pyridoxamine 5'-phosphate oxidase-related FMN- binding  44.63 
 
 
128 aa  99.4  2e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.941513  normal 
 
 
-
 
NC_013530  Xcel_1298  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  45.67 
 
 
134 aa  89.4  1e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2275  pyridoxamine 5'-phosphate oxidase-related FMN-binding  62.16 
 
 
196 aa  82  0.000000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.187193  normal  0.0620251 
 
 
-
 
NC_013158  Huta_2922  pyridoxamine 5'-phosphate oxidase-related FMN- binding  32.46 
 
 
134 aa  50.1  0.00001  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0268055  n/a   
 
 
-
 
NC_013093  Amir_4233  pyridoxamine 5'-phosphate oxidase-related FMN- binding  33.09 
 
 
143 aa  49.7  0.00001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1969  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.73 
 
 
152 aa  48.9  0.00002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3876  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.73 
 
 
143 aa  48.5  0.00003  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0335878 
 
 
-
 
NC_013124  Afer_0584  pyridoxamine 5'-phosphate oxidase-related FMN- binding  38.14 
 
 
141 aa  48.1  0.00004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.413113  n/a   
 
 
-
 
NC_013510  Tcur_1991  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  31.58 
 
 
143 aa  45.1  0.0003  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000065495  n/a   
 
 
-
 
NC_013922  Nmag_2083  putative F420-dependent enzyme  33.08 
 
 
133 aa  44.7  0.0004  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_014151  Cfla_3070  putative F420-dependent enzyme  37.78 
 
 
160 aa  44.3  0.0005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.446524  decreased coverage  0.000000025424 
 
 
-
 
NC_014210  Ndas_1607  putative F420-dependent enzyme  32.93 
 
 
143 aa  43.1  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.105507  normal  0.590252 
 
 
-
 
NC_009664  Krad_0082  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.71 
 
 
143 aa  42.7  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.747237  normal  0.05521 
 
 
-
 
NC_009380  Strop_3566  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.74 
 
 
145 aa  42.7  0.002  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0488  PPOX class putative F420-dependent enzyme  30.77 
 
 
144 aa  42.7  0.002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.620504  n/a   
 
 
-
 
NC_009953  Sare_3945  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.82 
 
 
145 aa  41.2  0.005  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.153198 
 
 
-
 
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