More than 300 homologs were found in PanDaTox collection
for query gene Tpau_1856 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_1856  HAD-superfamily hydrolase, subfamily IA, variant 3  100 
 
 
224 aa  441  1e-123  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3459  HAD-superfamily hydrolase, subfamily IA, variant 3  49.29 
 
 
216 aa  188  5.999999999999999e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0792688  n/a   
 
 
-
 
NC_013510  Tcur_4019  HAD-superfamily hydrolase, subfamily IA, variant 3  45.33 
 
 
232 aa  155  4e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0842123  n/a   
 
 
-
 
NC_007333  Tfu_2484  HAD family hydrolase  39.42 
 
 
218 aa  149  3e-35  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0784  HAD-superfamily hydrolase  41.75 
 
 
216 aa  142  6e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1436  hypothetical protein  39.9 
 
 
214 aa  127  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0136141  normal  0.0979488 
 
 
-
 
NC_014210  Ndas_3728  HAD-superfamily hydrolase, subfamily IA, variant 3  35.47 
 
 
224 aa  124  9e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.93668  normal 
 
 
-
 
NC_013131  Caci_6884  HAD-superfamily hydrolase, subfamily IA, variant 3  34.63 
 
 
207 aa  99  5e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.059143  normal 
 
 
-
 
NC_013739  Cwoe_1828  HAD-superfamily hydrolase, subfamily IA, variant 3  33.97 
 
 
211 aa  90.1  2e-17  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.978388 
 
 
-
 
NC_013131  Caci_1146  HAD-superfamily hydrolase, subfamily IA, variant 3  37.5 
 
 
210 aa  90.5  2e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1720  HAD-superfamily hydrolase, subfamily IA, variant 3  33.33 
 
 
209 aa  75.9  0.0000000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  hitchhiker  0.00306678  n/a   
 
 
-
 
NC_008048  Sala_2121  epoxide hydrolase domain-containing phosphatase  31.05 
 
 
215 aa  74.7  0.000000000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.581961  normal 
 
 
-
 
NC_008686  Pden_0043  HAD family hydrolase  40.91 
 
 
200 aa  74.7  0.000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.237358  normal 
 
 
-
 
NC_007958  RPD_2835  HAD family hydrolase  28.57 
 
 
231 aa  73.9  0.000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.160416  normal 
 
 
-
 
NC_013131  Caci_7621  HAD-superfamily hydrolase, subfamily IA, variant 3  39.58 
 
 
200 aa  70.1  0.00000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0848  HAD hydrolase, family IA, variant 3  37.3 
 
 
216 aa  68.9  0.00000000006  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_30870  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  39.67 
 
 
133 aa  68.2  0.0000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_18080  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  44.44 
 
 
211 aa  67  0.0000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.588171  normal  0.386622 
 
 
-
 
NC_009485  BBta_0649  hydrolase  26.89 
 
 
211 aa  66.2  0.0000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1973  epoxide hydrolase  28.5 
 
 
212 aa  66.2  0.0000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3477  HAD-superfamily hydrolase, subfamily IA, variant 3  28.05 
 
 
204 aa  65.5  0.0000000006  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0441  putative L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase)  36.61 
 
 
207 aa  65.5  0.0000000007  Burkholderia xenovorans LB400  Bacteria  normal  0.238349  normal 
 
 
-
 
NC_009921  Franean1_3961  HAD family hydrolase  33.82 
 
 
243 aa  65.1  0.0000000008  Frankia sp. EAN1pec  Bacteria  normal  0.389066  normal  0.14161 
 
 
-
 
NC_007794  Saro_0570  epoxide hydrolase domain-containing phosphatase  30 
 
 
214 aa  63.9  0.000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.457347  n/a   
 
 
-
 
NC_007958  RPD_3413  epoxide hydrolase-like phosphatase  27.04 
 
 
210 aa  63.9  0.000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.15685  normal  0.959449 
 
 
-
 
NC_009718  Fnod_0412  HAD family hydrolase  33.98 
 
 
223 aa  63.9  0.000000002  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1958  Haloacid dehalogenase domain protein hydrolase  28.65 
 
 
213 aa  63.2  0.000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.118058 
 
 
-
 
NC_009511  Swit_3116  HAD family hydrolase  41.94 
 
 
193 aa  62.8  0.000000004  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.441667 
 
 
-
 
NC_009457  VC0395_A1251  HAD family phosphatase  32.73 
 
 
202 aa  62.8  0.000000004  Vibrio cholerae O395  Bacteria  hitchhiker  0.000890892  n/a   
 
 
-
 
NC_010816  BLD_0524  putative HAD superfamily hydrolase  33.93 
 
 
209 aa  62.4  0.000000005  Bifidobacterium longum DJO10A  Bacteria  normal  0.172538  n/a   
 
 
-
 
NC_008044  TM1040_1460  HAD family hydrolase  28.84 
 
 
229 aa  62  0.000000007  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00552213  normal  0.266811 
 
 
-
 
NC_009719  Plav_0030  HAD family phosphatase  27.09 
 
 
213 aa  61.2  0.00000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.181132  normal 
 
 
-
 
NC_013093  Amir_6303  HAD-superfamily hydrolase, subfamily IA, variant 3  45.83 
 
 
133 aa  60.8  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1014  beta-phosphoglucomutase family hydrolase  36.11 
 
 
313 aa  61.2  0.00000001  Opitutus terrae PB90-1  Bacteria  normal  normal  0.125364 
 
 
-
 
NC_008009  Acid345_0142  HAD family hydrolase  37.5 
 
 
212 aa  61.2  0.00000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  hitchhiker  0.0023385 
 
 
-
 
NC_012669  Bcav_2047  HAD-superfamily hydrolase, subfamily IA, variant 3  36.11 
 
 
211 aa  60.5  0.00000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.044759 
 
 
-
 
NC_013132  Cpin_0647  HAD-superfamily hydrolase, subfamily IA, variant 3  41.67 
 
 
204 aa  60.5  0.00000002  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000028477  normal  0.274345 
 
 
-
 
NC_007777  Francci3_2256  HAD family hydrolase  31.36 
 
 
231 aa  60.1  0.00000002  Frankia sp. CcI3  Bacteria  hitchhiker  0.00707302  hitchhiker  0.00176576 
 
 
-
 
NC_009767  Rcas_3992  HAD family hydrolase  42.5 
 
 
220 aa  60.5  0.00000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.000540909 
 
 
-
 
NC_013037  Dfer_5618  HAD-superfamily hydrolase, subfamily IA, variant 3  40.54 
 
 
211 aa  60.8  0.00000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3244  HAD-superfamily hydrolase, subfamily IA, variant 3  30 
 
 
208 aa  60.1  0.00000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4067  HAD-superfamily hydrolase, phosphatase  26.73 
 
 
212 aa  60.8  0.00000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.144005  n/a   
 
 
-
 
NC_010681  Bphyt_3517  HAD-superfamily hydrolase, subfamily IA, variant 3  34.82 
 
 
207 aa  59.7  0.00000003  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00913759  normal  0.088603 
 
 
-
 
NC_012917  PC1_4218  phosphatase  34.82 
 
 
203 aa  59.7  0.00000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0179  HAD-superfamily hydrolase, subfamily IA, variant 3  32.37 
 
 
218 aa  59.3  0.00000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1787  Haloacid dehalogenase domain protein hydrolase  30.88 
 
 
218 aa  59.7  0.00000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.170193 
 
 
-
 
NC_008025  Dgeo_1667  HAD family hydrolase  44.12 
 
 
199 aa  58.5  0.00000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.0663843 
 
 
-
 
NC_012793  GWCH70_1783  HAD-superfamily hydrolase, subfamily IA, variant 1  27.72 
 
 
222 aa  58.5  0.00000007  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6895  HAD-superfamily hydrolase, subfamily IA, variant 3  30.29 
 
 
195 aa  58.5  0.00000007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0887  HAD family hydrolase  39.42 
 
 
206 aa  58.5  0.00000008  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0470  HAD-superfamily hydrolase, phosphatase  30.92 
 
 
219 aa  58.2  0.0000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.261482  n/a   
 
 
-
 
NC_007925  RPC_0645  epoxide hydrolase-like phosphatase  29.78 
 
 
220 aa  58.2  0.0000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1113  HAD family hydrolase  43.33 
 
 
228 aa  58.2  0.0000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.107985  hitchhiker  0.0043155 
 
 
-
 
NC_013421  Pecwa_4501  phosphatase  29.49 
 
 
203 aa  58.2  0.0000001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.355951  n/a   
 
 
-
 
NC_013530  Xcel_2434  HAD-superfamily hydrolase, subfamily IA, variant 3  31.16 
 
 
298 aa  57.4  0.0000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4147  HAD-superfamily hydrolase, subfamily IA, variant 3  35.88 
 
 
220 aa  57  0.0000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38090  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  35.4 
 
 
194 aa  57.4  0.0000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.516929  normal 
 
 
-
 
NC_007778  RPB_2805  HAD family hydrolase  27.91 
 
 
208 aa  57.4  0.0000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.187459 
 
 
-
 
NC_013132  Cpin_2236  HAD-superfamily hydrolase, subfamily IA, variant 3  38.24 
 
 
214 aa  57  0.0000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4881  HAD family hydrolase  29.27 
 
 
211 aa  57  0.0000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
BN001308  ANIA_01012  epoxide hydrolase, putative (AFU_orthologue; AFUA_1G12880)  27.71 
 
 
261 aa  56.2  0.0000004  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.103683  normal 
 
 
-
 
NC_010524  Lcho_3384  HAD family hydrolase  42.86 
 
 
206 aa  56.2  0.0000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011071  Smal_3290  HAD-superfamily hydrolase, subfamily IA, variant 3  51.72 
 
 
200 aa  55.8  0.0000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1967  putative HAD superfamily hydrolase  36.7 
 
 
234 aa  55.8  0.0000005  Bifidobacterium longum DJO10A  Bacteria  normal  0.0600927  n/a   
 
 
-
 
NC_013441  Gbro_1688  Haloacid dehalogenase domain protein hydrolase  48.15 
 
 
230 aa  55.5  0.0000006  Gordonia bronchialis DSM 43247  Bacteria  normal  0.520793  n/a   
 
 
-
 
NC_007955  Mbur_0033  HAD family hydrolase  23.62 
 
 
221 aa  55.5  0.0000007  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008255  CHU_0909  haloacid dehalogenase-like hydrolase  41.1 
 
 
211 aa  55.1  0.0000008  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.538395  normal  0.573349 
 
 
-
 
NC_010003  Pmob_0976  HAD family hydrolase  29.47 
 
 
198 aa  55.1  0.0000009  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_4187  phosphatase  28.57 
 
 
196 aa  54.3  0.000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0033  phosphatase  28.57 
 
 
196 aa  54.3  0.000001  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0029  phosphatase  28.57 
 
 
196 aa  53.5  0.000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2747  HAD superfamily hydrolase  35.05 
 
 
230 aa  53.9  0.000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00479401  n/a   
 
 
-
 
NC_009719  Plav_2026  HAD family hydrolase  35.48 
 
 
203 aa  53.9  0.000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.151114  normal  0.583157 
 
 
-
 
NC_011368  Rleg2_4436  HAD-superfamily hydrolase, subfamily IA, variant 3  32.61 
 
 
216 aa  53.5  0.000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00258568  normal 
 
 
-
 
NC_009338  Mflv_0023  HAD family hydrolase  39.83 
 
 
228 aa  53.9  0.000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.922489 
 
 
-
 
NC_013093  Amir_0361  HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like)  33.93 
 
 
203 aa  53.1  0.000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.751245  n/a   
 
 
-
 
NC_013457  VEA_000290  HAD superfamily hydrolase  38.03 
 
 
205 aa  53.1  0.000003  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6628  HAD family hydrolase  33.08 
 
 
205 aa  53.5  0.000003  Burkholderia sp. 383  Bacteria  normal  0.563326  normal  0.0579332 
 
 
-
 
NC_008048  Sala_2997  HAD family hydrolase  33.91 
 
 
203 aa  53.1  0.000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.155804 
 
 
-
 
NC_008578  Acel_0234  HAD family hydrolase  38.39 
 
 
225 aa  53.5  0.000003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.961854 
 
 
-
 
NC_008825  Mpe_A3093  hypothetical protein  44.78 
 
 
209 aa  53.5  0.000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.368672 
 
 
-
 
NC_009523  RoseRS_1151  HAD family hydrolase  38.75 
 
 
219 aa  53.5  0.000003  Roseiflexus sp. RS-1  Bacteria  normal  0.205266  hitchhiker  0.00490249 
 
 
-
 
NC_009012  Cthe_0532  HAD superfamily hydrolase-like protein  34.04 
 
 
163 aa  53.1  0.000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3811  haloacid dehalogenase, type II  35.96 
 
 
226 aa  53.1  0.000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.277165  n/a   
 
 
-
 
NC_013510  Tcur_3180  HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like)  45.45 
 
 
236 aa  52.8  0.000004  Thermomonospora curvata DSM 43183  Bacteria  normal  0.177133  n/a   
 
 
-
 
NC_011083  SeHA_C4350  phosphatase  25.14 
 
 
199 aa  52.8  0.000004  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4237  phosphatase  25.14 
 
 
199 aa  52.8  0.000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_4259  HAD-superfamily hydrolase, subfamily IA, variant 3  31.68 
 
 
203 aa  52.4  0.000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4415  phosphatase  25.14 
 
 
199 aa  52.8  0.000005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2458  HAD family hydrolase  32.14 
 
 
208 aa  52.8  0.000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.337506  normal  0.279583 
 
 
-
 
NC_011149  SeAg_B4259  phosphatase  25.14 
 
 
199 aa  52.8  0.000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A4304  phosphatase  25.14 
 
 
199 aa  52.8  0.000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.766315  normal 
 
 
-
 
NC_012792  Vapar_6192  HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like)  42.19 
 
 
224 aa  52.4  0.000006  Variovorax paradoxus S110  Bacteria  normal  0.544063  n/a   
 
 
-
 
NC_008789  Hhal_0344  beta-phosphoglucomutase family hydrolase  33.11 
 
 
250 aa  52.4  0.000006  Halorhodospira halophila SL1  Bacteria  normal  0.118132  n/a   
 
 
-
 
NC_011772  BCG9842_B2564  2-haloalkanoic acid dehalogenase  34.15 
 
 
255 aa  52  0.000007  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00980265 
 
 
-
 
NC_011891  A2cp1_3955  haloacid dehalogenase, type II  35 
 
 
226 aa  52  0.000007  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4647  HAD family phosphatase  28.5 
 
 
213 aa  52  0.000007  Caulobacter sp. K31  Bacteria  normal  0.402019  normal 
 
 
-
 
NC_008025  Dgeo_1288  HAD family hydrolase  35.87 
 
 
212 aa  52  0.000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.888389  normal 
 
 
-
 
NC_010622  Bphy_2715  HAD family hydrolase  38.67 
 
 
207 aa  52  0.000007  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_0649  HAD family hydrolase  34.15 
 
 
239 aa  52  0.000007  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
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