More than 300 homologs were found in PanDaTox collection
for query gene Tpau_0582 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_0582  short-chain dehydrogenase/reductase SDR  100 
 
 
266 aa  530  1e-150  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3711  short-chain dehydrogenase/reductase SDR  51.91 
 
 
268 aa  262  4e-69  Mycobacterium sp. KMS  Bacteria  normal  0.428554  normal 
 
 
-
 
NC_009077  Mjls_3643  short-chain dehydrogenase/reductase SDR  51.91 
 
 
268 aa  261  6e-69  Mycobacterium sp. JLS  Bacteria  normal  0.129425  normal 
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  51.15 
 
 
268 aa  258  5.0000000000000005e-68  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  50.76 
 
 
268 aa  254  1.0000000000000001e-66  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2545  short-chain dehydrogenase/reductase SDR  48.85 
 
 
268 aa  248  9e-65  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.522448  normal 
 
 
-
 
NC_008146  Mmcs_3638  short-chain dehydrogenase/reductase SDR  51.41 
 
 
255 aa  246  3e-64  Mycobacterium sp. MCS  Bacteria  normal  0.125829  n/a   
 
 
-
 
NC_008726  Mvan_4098  short-chain dehydrogenase/reductase SDR  48.47 
 
 
268 aa  245  6e-64  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.230051  normal 
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  50 
 
 
268 aa  245  6.999999999999999e-64  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  45.31 
 
 
262 aa  208  7e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  45.56 
 
 
267 aa  204  1e-51  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  43.75 
 
 
273 aa  195  5.000000000000001e-49  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  39.85 
 
 
267 aa  157  2e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  39.85 
 
 
267 aa  157  2e-37  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  39.85 
 
 
267 aa  156  3e-37  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  41.3 
 
 
263 aa  152  7e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  40.79 
 
 
258 aa  150  3e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  37.2 
 
 
262 aa  144  1e-33  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  35.18 
 
 
256 aa  142  6e-33  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  37.75 
 
 
266 aa  140  1.9999999999999998e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  45.64 
 
 
291 aa  139  6e-32  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  34.54 
 
 
264 aa  139  7e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  36.99 
 
 
266 aa  138  1e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  39.52 
 
 
258 aa  137  1e-31  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  34.54 
 
 
260 aa  137  2e-31  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  36.33 
 
 
253 aa  135  5e-31  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  37.9 
 
 
259 aa  135  7.000000000000001e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0606  short-chain dehydrogenase/reductase SDR  39.11 
 
 
256 aa  134  1.9999999999999998e-30  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  32.95 
 
 
263 aa  133  3e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_010581  Bind_3244  short-chain dehydrogenase/reductase SDR  37.84 
 
 
262 aa  133  3.9999999999999996e-30  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  30.04 
 
 
259 aa  132  6e-30  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  32.33 
 
 
264 aa  130  2.0000000000000002e-29  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  35.94 
 
 
262 aa  130  2.0000000000000002e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  31.02 
 
 
259 aa  129  4.0000000000000003e-29  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  42.33 
 
 
266 aa  129  6e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  29.25 
 
 
265 aa  129  6e-29  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  36.22 
 
 
259 aa  128  8.000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  34.41 
 
 
258 aa  128  9.000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  37.1 
 
 
259 aa  127  1.0000000000000001e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  36.29 
 
 
259 aa  128  1.0000000000000001e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  34.77 
 
 
262 aa  127  2.0000000000000002e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  38.37 
 
 
266 aa  127  2.0000000000000002e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0477  short-chain dehydrogenase/reductase SDR  39.39 
 
 
256 aa  126  3e-28  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  41.58 
 
 
265 aa  125  5e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  37.05 
 
 
281 aa  125  6e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  37.05 
 
 
281 aa  125  6e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  35.1 
 
 
253 aa  125  6e-28  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  37.05 
 
 
266 aa  125  9e-28  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  36.61 
 
 
270 aa  125  9e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  38.62 
 
 
265 aa  124  1e-27  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  31.98 
 
 
258 aa  124  1e-27  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  46.28 
 
 
263 aa  124  1e-27  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  28.85 
 
 
265 aa  124  1e-27  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  36.14 
 
 
264 aa  124  2e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  36.61 
 
 
266 aa  124  2e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  41.05 
 
 
259 aa  124  2e-27  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  37.05 
 
 
266 aa  124  2e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  42.55 
 
 
275 aa  124  2e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  42.54 
 
 
265 aa  123  3e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  31.5 
 
 
267 aa  123  4e-27  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  35.48 
 
 
255 aa  122  4e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  37.85 
 
 
289 aa  122  5e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_007925  RPC_0055  short-chain dehydrogenase/reductase SDR  38.34 
 
 
259 aa  122  5e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  35.95 
 
 
259 aa  122  6e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  36.61 
 
 
266 aa  122  6e-27  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  32.41 
 
 
261 aa  122  7e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  42.11 
 
 
265 aa  122  8e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  33.63 
 
 
264 aa  121  9e-27  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  33.6 
 
 
258 aa  121  9.999999999999999e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  38.2 
 
 
266 aa  121  9.999999999999999e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  38.95 
 
 
258 aa  121  9.999999999999999e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_009636  Smed_1269  short-chain dehydrogenase/reductase SDR  37.4 
 
 
294 aa  121  9.999999999999999e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.618635  normal  0.87927 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  36.28 
 
 
264 aa  120  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  32.02 
 
 
261 aa  121  1.9999999999999998e-26  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  34.48 
 
 
263 aa  120  1.9999999999999998e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  30.71 
 
 
258 aa  120  1.9999999999999998e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  29.53 
 
 
257 aa  120  1.9999999999999998e-26  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  37.85 
 
 
266 aa  120  1.9999999999999998e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  40.21 
 
 
264 aa  120  1.9999999999999998e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  41.71 
 
 
259 aa  120  3e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  36.61 
 
 
266 aa  119  3.9999999999999996e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  35.27 
 
 
270 aa  119  4.9999999999999996e-26  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  40 
 
 
292 aa  119  7e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  35.32 
 
 
271 aa  118  7.999999999999999e-26  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  35.84 
 
 
262 aa  118  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  31.62 
 
 
249 aa  118  9.999999999999999e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  36.26 
 
 
262 aa  117  1.9999999999999998e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  35.77 
 
 
250 aa  117  1.9999999999999998e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  36.26 
 
 
262 aa  117  1.9999999999999998e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  36.26 
 
 
262 aa  116  3.9999999999999997e-25  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  36.28 
 
 
263 aa  116  3.9999999999999997e-25  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_011145  AnaeK_3912  short-chain dehydrogenase/reductase SDR  39.52 
 
 
266 aa  116  5e-25  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  36.12 
 
 
269 aa  115  6e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  39.89 
 
 
275 aa  115  6.9999999999999995e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  34.41 
 
 
265 aa  115  8.999999999999998e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  39.78 
 
 
262 aa  115  8.999999999999998e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  32.58 
 
 
261 aa  115  8.999999999999998e-25  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  35.84 
 
 
262 aa  115  1.0000000000000001e-24  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_011891  A2cp1_3990  short-chain dehydrogenase/reductase SDR  39.52 
 
 
266 aa  114  1.0000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  30.89 
 
 
261 aa  115  1.0000000000000001e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
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