7 homologs were found in PanDaTox collection
for query gene Tmel_1792 on replicon NC_009616
Organism: Thermosipho melanesiensis BI429



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009616  Tmel_1792  TPR repeat-containing protein  100 
 
 
367 aa  706    Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0004  TPR repeat-containing protein  28.53 
 
 
377 aa  97.1  4e-19  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0004  TPR repeat-containing protein  28.53 
 
 
377 aa  97.1  4e-19  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1012  hypothetical protein  29.67 
 
 
627 aa  72.4  0.00000000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2380  TPR repeat-containing protein  32.85 
 
 
246 aa  46.6  0.0008  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0010  TPR repeat-containing protein  36.99 
 
 
253 aa  45.4  0.002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0475  TPR repeat-containing protein  26.95 
 
 
469 aa  43.9  0.004  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000269672  n/a   
 
 
-
 
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