More than 300 homologs were found in PanDaTox collection
for query gene Tgr7_2759 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_2759  glycine cleavage system aminomethyltransferase T  100 
 
 
363 aa  734    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5960  glycine cleavage system aminomethyltransferase T  66.2 
 
 
360 aa  468  1.0000000000000001e-131  Pseudomonas aeruginosa PA7  Bacteria  normal  0.510712  n/a   
 
 
-
 
NC_008463  PA14_68870  glycine cleavage system aminomethyltransferase T  65.65 
 
 
360 aa  468  1.0000000000000001e-131  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2721  glycine cleavage system aminomethyltransferase T  62.71 
 
 
364 aa  457  1e-127  Shewanella amazonensis SB2B  Bacteria  normal  0.0309145  normal 
 
 
-
 
NC_012560  Avin_47280  glycine cleavage system aminomethyltransferase T  63.71 
 
 
360 aa  452  1.0000000000000001e-126  Azotobacter vinelandii DJ  Bacteria  normal  0.783073  n/a   
 
 
-
 
NC_009439  Pmen_0331  glycine cleavage system aminomethyltransferase T  62.47 
 
 
365 aa  452  1.0000000000000001e-126  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5428  glycine cleavage system aminomethyltransferase T  60.66 
 
 
360 aa  449  1e-125  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.875853  normal  0.0297013 
 
 
-
 
NC_010159  YpAngola_A3830  glycine cleavage system aminomethyltransferase T  59.73 
 
 
365 aa  446  1.0000000000000001e-124  Yersinia pestis Angola  Bacteria  normal  0.434299  normal 
 
 
-
 
NC_004578  PSPTO_0316  glycine cleavage system T protein  60.66 
 
 
360 aa  444  1.0000000000000001e-124  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0246  glycine cleavage system aminomethyltransferase T  61.22 
 
 
360 aa  445  1.0000000000000001e-124  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0867  glycine cleavage system aminomethyltransferase T  59.45 
 
 
365 aa  445  1.0000000000000001e-124  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0863  glycine cleavage system aminomethyltransferase T  59.73 
 
 
365 aa  446  1.0000000000000001e-124  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00861  glycine cleavage system aminomethyltransferase T  61.5 
 
 
359 aa  443  1e-123  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3064  glycine cleavage system aminomethyltransferase T  60.77 
 
 
364 aa  443  1e-123  Shewanella loihica PV-4  Bacteria  normal  0.0393389  normal 
 
 
-
 
NC_008228  Patl_3592  glycine cleavage system aminomethyltransferase T  60.94 
 
 
359 aa  442  1e-123  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3151  glycine cleavage system aminomethyltransferase T  59.94 
 
 
364 aa  442  1e-123  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.000770906  n/a   
 
 
-
 
CP001509  ECD_02737  glycine cleavage system aminomethyltransferase T  58.79 
 
 
364 aa  437  9.999999999999999e-123  Escherichia coli BL21(DE3)  Bacteria  normal  0.0166736  n/a   
 
 
-
 
CP001637  EcDH1_0787  glycine cleavage system T protein  58.79 
 
 
364 aa  437  9.999999999999999e-123  Escherichia coli DH1  Bacteria  normal  0.395738  n/a   
 
 
-
 
NC_009800  EcHS_A3064  glycine cleavage system aminomethyltransferase T  58.79 
 
 
364 aa  437  9.999999999999999e-123  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1274  glycine cleavage system aminomethyltransferase T  59.39 
 
 
362 aa  441  9.999999999999999e-123  Colwellia psychrerythraea 34H  Bacteria  normal  0.0243326  n/a   
 
 
-
 
NC_004347  SO_0779  glycine cleavage system aminomethyltransferase T  59.94 
 
 
364 aa  439  9.999999999999999e-123  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010468  EcolC_0804  glycine cleavage system aminomethyltransferase T  58.79 
 
 
364 aa  437  9.999999999999999e-123  Escherichia coli ATCC 8739  Bacteria  normal  0.133076  normal 
 
 
-
 
NC_009436  Ent638_3324  glycine cleavage system aminomethyltransferase T  59.12 
 
 
364 aa  438  9.999999999999999e-123  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3037  glycine cleavage system aminomethyltransferase T  58.79 
 
 
364 aa  438  9.999999999999999e-123  Escherichia coli SMS-3-5  Bacteria  normal  0.318867  normal 
 
 
-
 
NC_009801  EcE24377A_3232  glycine cleavage system aminomethyltransferase T  58.79 
 
 
364 aa  437  9.999999999999999e-123  Escherichia coli E24377A  Bacteria  normal  0.61058  n/a   
 
 
-
 
NC_008322  Shewmr7_0622  glycine cleavage system aminomethyltransferase T  59.94 
 
 
364 aa  439  9.999999999999999e-123  Shewanella sp. MR-7  Bacteria  normal  0.0347517  normal 
 
 
-
 
NC_012892  B21_02700  hypothetical protein  58.79 
 
 
364 aa  437  9.999999999999999e-123  Escherichia coli BL21  Bacteria  normal  0.0235017  n/a   
 
 
-
 
NC_012880  Dd703_3311  glycine cleavage system aminomethyltransferase T  59.51 
 
 
366 aa  438  9.999999999999999e-123  Dickeya dadantii Ech703  Bacteria  normal  0.574966  n/a   
 
 
-
 
NC_009832  Spro_3916  glycine cleavage system aminomethyltransferase T  58.84 
 
 
365 aa  439  9.999999999999999e-123  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_4196  glycine cleavage system aminomethyltransferase T  58.24 
 
 
364 aa  434  1e-121  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3801  glycine cleavage system aminomethyltransferase T  60.22 
 
 
364 aa  436  1e-121  Shewanella baltica OS195  Bacteria  normal  0.785369  normal 
 
 
-
 
NC_011149  SeAg_B3213  glycine cleavage system aminomethyltransferase T  57.97 
 
 
364 aa  435  1e-121  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0385868  n/a   
 
 
-
 
NC_011205  SeD_A3392  glycine cleavage system aminomethyltransferase T  58.24 
 
 
364 aa  436  1e-121  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.874381 
 
 
-
 
NC_011662  Tmz1t_3205  glycine cleavage system aminomethyltransferase T  62.64 
 
 
363 aa  437  1e-121  Thauera sp. MZ1T  Bacteria  hitchhiker  0.0000683742  n/a   
 
 
-
 
NC_011663  Sbal223_3619  glycine cleavage system aminomethyltransferase T  60.22 
 
 
364 aa  437  1e-121  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0617  glycine cleavage system aminomethyltransferase T  60.22 
 
 
364 aa  437  1e-121  Shewanella baltica OS155  Bacteria  normal  0.143333  n/a   
 
 
-
 
NC_007954  Sden_0833  glycine cleavage system aminomethyltransferase T  59.39 
 
 
364 aa  435  1e-121  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00162887  n/a   
 
 
-
 
NC_011083  SeHA_C3287  glycine cleavage system aminomethyltransferase T  58.24 
 
 
364 aa  436  1e-121  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3303  glycine cleavage system aminomethyltransferase T  59.67 
 
 
364 aa  436  1e-121  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.00589278  n/a   
 
 
-
 
NC_008321  Shewmr4_3331  glycine cleavage system aminomethyltransferase T  59.67 
 
 
364 aa  437  1e-121  Shewanella sp. MR-4  Bacteria  normal  0.227448  normal 
 
 
-
 
NC_011094  SeSA_A3225  glycine cleavage system aminomethyltransferase T  57.97 
 
 
364 aa  435  1e-121  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.123726  normal 
 
 
-
 
NC_011080  SNSL254_A3290  glycine cleavage system aminomethyltransferase T  58.24 
 
 
364 aa  436  1e-121  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3501  glycine cleavage system aminomethyltransferase T  59.67 
 
 
364 aa  437  1e-121  Shewanella sp. ANA-3  Bacteria  normal  0.65276  normal 
 
 
-
 
NC_010658  SbBS512_E3326  glycine cleavage system aminomethyltransferase T  58.52 
 
 
364 aa  436  1e-121  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3211  glycine cleavage system aminomethyltransferase T  59.39 
 
 
364 aa  436  1e-121  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00211141  n/a   
 
 
-
 
NC_012917  PC1_0622  glycine cleavage system aminomethyltransferase T  57.8 
 
 
371 aa  434  1e-120  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.785949  n/a   
 
 
-
 
NC_010506  Swoo_3969  glycine cleavage system aminomethyltransferase T  59.39 
 
 
364 aa  434  1e-120  Shewanella woodyi ATCC 51908  Bacteria  normal  0.431724  normal 
 
 
-
 
NC_009665  Shew185_3677  glycine cleavage system aminomethyltransferase T  59.67 
 
 
364 aa  433  1e-120  Shewanella baltica OS185  Bacteria  normal  0.593611  n/a   
 
 
-
 
NC_012912  Dd1591_3437  glycine cleavage system aminomethyltransferase T  56.95 
 
 
366 aa  431  1e-119  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_01654  glycine cleavage system aminomethyltransferase T  59.34 
 
 
369 aa  429  1e-119  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0838  glycine cleavage system aminomethyltransferase T  58.06 
 
 
371 aa  428  1e-119  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3675  glycine cleavage system aminomethyltransferase T  59.12 
 
 
364 aa  426  1e-118  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3073  glycine cleavage system aminomethyltransferase T  59.62 
 
 
370 aa  427  1e-118  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.116584 
 
 
-
 
NC_013889  TK90_1720  glycine cleavage system T protein  58.84 
 
 
365 aa  424  1e-117  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.845128 
 
 
-
 
NC_010322  PputGB1_5254  glycine cleavage system aminomethyltransferase T  58.73 
 
 
360 aa  418  1e-116  Pseudomonas putida GB-1  Bacteria  normal  0.55872  normal 
 
 
-
 
NC_009727  CBUD_0289  glycine cleavage system aminomethyltransferase T  56.67 
 
 
383 aa  420  1e-116  Coxiella burnetii Dugway 5J108-111  Bacteria  hitchhiker  0.00965774  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1904  glycine cleavage system aminomethyltransferase T  56.39 
 
 
383 aa  420  1e-116  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5194  glycine cleavage system aminomethyltransferase T  58.73 
 
 
360 aa  417  9.999999999999999e-116  Pseudomonas putida KT2440  Bacteria  normal  0.148183  normal 
 
 
-
 
NC_002977  MCA0350  glycine cleavage system aminomethyltransferase T  56.75 
 
 
360 aa  414  9.999999999999999e-116  Methylococcus capsulatus str. Bath  Bacteria  normal  0.536076  n/a   
 
 
-
 
NC_010501  PputW619_5019  glycine cleavage system aminomethyltransferase T  59.28 
 
 
360 aa  416  9.999999999999999e-116  Pseudomonas putida W619  Bacteria  normal  0.160726  normal 
 
 
-
 
NC_009512  Pput_5101  glycine cleavage system aminomethyltransferase T  58.73 
 
 
360 aa  417  9.999999999999999e-116  Pseudomonas putida F1  Bacteria  normal  0.471331  normal 
 
 
-
 
NC_010513  Xfasm12_0155  glycine cleavage system aminomethyltransferase T  55.98 
 
 
368 aa  412  1e-114  Xylella fastidiosa M12  Bacteria  normal  0.843588  n/a   
 
 
-
 
NC_007912  Sde_0338  glycine cleavage system aminomethyltransferase T  59.62 
 
 
363 aa  414  1e-114  Saccharophagus degradans 2-40  Bacteria  normal  0.0368876  normal  0.123109 
 
 
-
 
NC_010577  XfasM23_0136  glycine cleavage system aminomethyltransferase T  55.98 
 
 
368 aa  412  1e-114  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp0132  glycine cleavage system aminomethyltransferase T  55.59 
 
 
360 aa  405  1.0000000000000001e-112  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0117  glycine cleavage system aminomethyltransferase T  55.59 
 
 
360 aa  405  1.0000000000000001e-112  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_2463  aminomethyltransferase  56.91 
 
 
363 aa  403  1e-111  Dechloromonas aromatica RCB  Bacteria  normal  0.27536  normal 
 
 
-
 
NC_007404  Tbd_0178  glycine cleavage system aminomethyltransferase T  57.58 
 
 
362 aa  401  1e-111  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.146261 
 
 
-
 
NC_007484  Noc_0500  glycine cleavage system T protein  55.4 
 
 
371 aa  403  1e-111  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0214  glycine cleavage system aminomethyltransferase T  57.92 
 
 
360 aa  404  1e-111  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3487  glycine cleavage system aminomethyltransferase T  57.78 
 
 
375 aa  399  9.999999999999999e-111  Ralstonia pickettii 12J  Bacteria  normal  0.478453  normal 
 
 
-
 
NC_012856  Rpic12D_3160  glycine cleavage system aminomethyltransferase T  57.52 
 
 
375 aa  397  1e-109  Ralstonia pickettii 12D  Bacteria  normal  0.94655  normal 
 
 
-
 
NC_008789  Hhal_1190  glycine cleavage system aminomethyltransferase T  57.81 
 
 
360 aa  393  1e-108  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3325  glycine cleavage system aminomethyltransferase T  57.03 
 
 
372 aa  394  1e-108  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3293  glycine cleavage system aminomethyltransferase T  57.26 
 
 
375 aa  390  1e-107  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.915695 
 
 
-
 
NC_010508  Bcenmc03_0159  glycine cleavage system aminomethyltransferase T  55.41 
 
 
372 aa  385  1e-106  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3255  glycine cleavage system T protein  57.57 
 
 
584 aa  386  1e-106  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0143  glycine cleavage system aminomethyltransferase T  55.41 
 
 
372 aa  386  1e-106  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.228599  normal  0.397791 
 
 
-
 
NC_008390  Bamb_0133  glycine cleavage system aminomethyltransferase T  55.41 
 
 
372 aa  385  1e-106  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3926  glycine cleavage system aminomethyltransferase T  56.87 
 
 
372 aa  382  1e-105  Burkholderia pseudomallei 668  Bacteria  normal  0.108105  n/a   
 
 
-
 
NC_006348  BMA2994.1  glycine cleavage system aminomethyltransferase T  56.87 
 
 
372 aa  382  1e-105  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3061  glycine cleavage system aminomethyltransferase T  56.87 
 
 
372 aa  382  1e-105  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0127  glycine cleavage system aminomethyltransferase T  56.87 
 
 
372 aa  382  1e-105  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0145  glycine cleavage system aminomethyltransferase T  55.14 
 
 
372 aa  383  1e-105  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.731192 
 
 
-
 
NC_010622  Bphy_3003  glycine cleavage system aminomethyltransferase T  55.5 
 
 
372 aa  382  1e-105  Burkholderia phymatum STM815  Bacteria  normal  normal  0.265781 
 
 
-
 
NC_008836  BMA10229_A1542  glycine cleavage system aminomethyltransferase T  56.87 
 
 
372 aa  382  1e-105  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3997  glycine cleavage system aminomethyltransferase T  56.87 
 
 
372 aa  382  1e-105  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2909  glycine cleavage system aminomethyltransferase T  55.41 
 
 
372 aa  384  1e-105  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.803939  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3309  glycine cleavage system aminomethyltransferase T  56.87 
 
 
372 aa  382  1e-105  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0146  glycine cleavage system aminomethyltransferase T  55.41 
 
 
372 aa  384  1e-105  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A3329  glycine cleavage system aminomethyltransferase T  55.41 
 
 
375 aa  379  1e-104  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0056  glycine cleavage system aminomethyltransferase T  55.41 
 
 
384 aa  380  1e-104  Burkholderia xenovorans LB400  Bacteria  normal  0.298733  normal 
 
 
-
 
NC_007204  Psyc_0799  glycine cleavage system aminomethyltransferase T  53.33 
 
 
390 aa  375  1e-103  Psychrobacter arcticus 273-4  Bacteria  normal  0.172783  normal 
 
 
-
 
NC_010681  Bphyt_3880  glycine cleavage system aminomethyltransferase T  55.53 
 
 
372 aa  377  1e-103  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0806  glycine cleavage system aminomethyltransferase T  52.53 
 
 
390 aa  374  1e-102  Psychrobacter cryohalolentis K5  Bacteria  unclonable  0.00000414833  normal 
 
 
-
 
NC_007973  Rmet_3480  glycine cleavage system aminomethyltransferase T  53.3 
 
 
375 aa  372  1e-102  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1722  glycine cleavage system aminomethyltransferase T  53.21 
 
 
381 aa  361  1e-98  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00031544  normal 
 
 
-
 
NC_008576  Mmc1_1559  aminomethyltransferase  50.14 
 
 
371 aa  340  2e-92  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2576  glycine cleavage system aminomethyltransferase T  50.55 
 
 
364 aa  333  2e-90  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.213671  normal  0.0237764 
 
 
-
 
NC_007348  Reut_B4806  glycine cleavage system T protein  49.33 
 
 
383 aa  319  5e-86  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>