More than 300 homologs were found in PanDaTox collection
for query gene Tgr7_2623 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_2623  methylthioribulose-1-phosphate dehydratase  100 
 
 
207 aa  427  1e-119  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0907  class II aldolase/adducin family protein  55.45 
 
 
208 aa  236  2e-61  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1855  methylthioribulose-1-phosphate dehydratase  56.02 
 
 
204 aa  228  4e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.123422  normal  0.880882 
 
 
-
 
NC_007492  Pfl01_1724  methylthioribulose-1-phosphate dehydratase  52.82 
 
 
208 aa  225  4e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3589  methylthioribulose-1-phosphate dehydratase  55.96 
 
 
205 aa  224  5.0000000000000005e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0799  methylthioribulose-1-phosphate dehydratase  54.55 
 
 
227 aa  224  8e-58  Methylococcus capsulatus str. Bath  Bacteria  normal  0.540069  n/a   
 
 
-
 
NC_008463  PA14_42740  methylthioribulose-1-phosphate dehydratase  55.44 
 
 
205 aa  224  8e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2045  class II aldolase/adducin domain protein  54.92 
 
 
204 aa  223  2e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0362341  n/a   
 
 
-
 
NC_013889  TK90_1788  methylthioribulose-1-phosphate dehydratase  52.68 
 
 
206 aa  221  7e-57  Thioalkalivibrio sp. K90mix  Bacteria  hitchhiker  0.00210025  normal  0.0224188 
 
 
-
 
NC_012560  Avin_23780  methylthioribulose-1-phosphate dehydratase  54.12 
 
 
206 aa  220  9.999999999999999e-57  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1782  methylthioribulose-1-phosphate dehydratase  56.22 
 
 
213 aa  219  1.9999999999999999e-56  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.249759 
 
 
-
 
NC_010577  XfasM23_1343  methylthioribulose-1-phosphate dehydratase  52.48 
 
 
218 aa  216  1e-55  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_06079  methylthioribulose-1-phosphate dehydratase  57.38 
 
 
208 aa  216  2e-55  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.039804  n/a   
 
 
-
 
NC_010717  PXO_00848  methylthioribulose-1-phosphate dehydratase  57.38 
 
 
208 aa  216  2e-55  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.000215096  n/a   
 
 
-
 
NC_010513  Xfasm12_1410  methylthioribulose-1-phosphate dehydratase  51.98 
 
 
218 aa  214  5e-55  Xylella fastidiosa M12  Bacteria  normal  0.238632  n/a   
 
 
-
 
NC_012917  PC1_3303  methylthioribulose-1-phosphate dehydratase  50 
 
 
205 aa  201  8e-51  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0942  methylthioribulose-1-phosphate dehydratase  51.03 
 
 
206 aa  199  1.9999999999999998e-50  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_1514  methylthioribulose-1-phosphate dehydratase  43.37 
 
 
203 aa  199  3e-50  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.430865  n/a   
 
 
-
 
NC_013421  Pecwa_3457  methylthioribulose-1-phosphate dehydratase  49.48 
 
 
205 aa  197  1.0000000000000001e-49  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0918  methylthioribulose-1-phosphate dehydratase  49.24 
 
 
205 aa  194  1e-48  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3182  methylthioribulose-1-phosphate dehydratase  48.42 
 
 
222 aa  192  2e-48  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3331  methylthioribulose-1-phosphate dehydratase  48.42 
 
 
222 aa  192  2e-48  Yersinia pestis Angola  Bacteria  normal  normal  0.903838 
 
 
-
 
NC_010465  YPK_3321  methylthioribulose-1-phosphate dehydratase  48.42 
 
 
222 aa  192  4e-48  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0885  methylthioribulose-1-phosphate dehydratase  47.94 
 
 
204 aa  186  2e-46  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0017  methylthioribulose-1-phosphate dehydratase  51.01 
 
 
213 aa  185  3e-46  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1143  methylthioribulose-1-phosphate dehydratase  46.88 
 
 
204 aa  181  6e-45  Enterobacter sp. 638  Bacteria  normal  normal  0.763715 
 
 
-
 
NC_011365  Gdia_1415  methylthioribulose-1-phosphate dehydratase  47.15 
 
 
208 aa  175  4e-43  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1852  class II aldolase/adducin family protein  42.38 
 
 
207 aa  168  6e-41  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.604682  normal  0.0869346 
 
 
-
 
NC_009485  BBta_2510  methylthioribulose-1-phosphate dehydratase  45.18 
 
 
216 aa  154  1e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.490663  normal 
 
 
-
 
NC_007513  Syncc9902_1845  putative sugar aldolase  42.05 
 
 
206 aa  138  7e-32  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0490  methylthioribulose-1-phosphate dehydratase  38.3 
 
 
195 aa  135  4e-31  Synechococcus sp. CC9605  Bacteria  normal  0.290986  normal  0.370435 
 
 
-
 
NC_013161  Cyan8802_1603  methylthioribulose-1-phosphate dehydratase  36.41 
 
 
204 aa  132  3.9999999999999996e-30  Cyanothece sp. PCC 8802  Bacteria  normal  0.648125  normal 
 
 
-
 
NC_011726  PCC8801_1578  methylthioribulose-1-phosphate dehydratase  36.41 
 
 
204 aa  132  3.9999999999999996e-30  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008820  P9303_21771  putative sugar aldolase  40 
 
 
207 aa  131  9e-30  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.0878998 
 
 
-
 
NC_011206  Lferr_0598  methylthioribulose-1-phosphate dehydratase  37.91 
 
 
206 aa  130  2.0000000000000002e-29  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.635649  normal 
 
 
-
 
NC_011761  AFE_0436  aldolase, class II  37.91 
 
 
206 aa  130  2.0000000000000002e-29  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1993  methylthioribulose-1-phosphate dehydratase  40.78 
 
 
206 aa  126  2.0000000000000002e-28  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.5622 
 
 
-
 
NC_010730  SYO3AOP1_1268  methylthioribulose-1-phosphate dehydratase  38.12 
 
 
215 aa  125  6e-28  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0307  methylthioribulose-1-phosphate dehydratase  35.53 
 
 
205 aa  120  9.999999999999999e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.284092 
 
 
-
 
NC_013205  Aaci_0098  methylthioribulose-1-phosphate dehydratase  34.95 
 
 
211 aa  117  9.999999999999999e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.241921  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3867  methylthioribulose-1-phosphate dehydratase  31.35 
 
 
212 aa  102  3e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2737  methylthioribulose-1-phosphate dehydratase  30.81 
 
 
212 aa  99.8  3e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0029503  n/a   
 
 
-
 
NC_013411  GYMC61_1747  methylthioribulose-1-phosphate dehydratase  35.48 
 
 
210 aa  99.8  3e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_4105  methylthioribulose-1-phosphate dehydratase  30.81 
 
 
212 aa  99  5e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0852  methylthioribulose-1-phosphate dehydratase  32.62 
 
 
213 aa  99  5e-20  Geobacillus sp. WCH70  Bacteria  normal  0.269604  n/a   
 
 
-
 
NC_005945  BAS3948  methylthioribulose-1-phosphate dehydratase  30.27 
 
 
212 aa  96.7  2e-19  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3780  methylthioribulose-1-phosphate dehydratase  30.27 
 
 
212 aa  97.1  2e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.79505  n/a   
 
 
-
 
NC_007530  GBAA_4257  methylthioribulose-1-phosphate dehydratase  30.27 
 
 
212 aa  96.7  2e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4169  methylthioribulose-1-phosphate dehydratase  30.27 
 
 
212 aa  97.1  2e-19  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000628786  n/a   
 
 
-
 
NC_011772  BCG9842_B1091  methylthioribulose-1-phosphate dehydratase  30.27 
 
 
212 aa  96.7  2e-19  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4147  methylthioribulose-1-phosphate dehydratase  30.27 
 
 
212 aa  96.7  2e-19  Bacillus cereus B4264  Bacteria  normal  0.0451904  n/a   
 
 
-
 
NC_011773  BCAH820_4059  methylthioribulose-1-phosphate dehydratase  30.27 
 
 
212 aa  96.7  2e-19  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK3795  methylthioribulose-1-phosphate dehydratase  30.27 
 
 
212 aa  96.3  3e-19  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011697  PHATRDRAFT_31147  predicted protein  29.55 
 
 
559 aa  90.9  1e-17  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0700452  n/a   
 
 
-
 
NC_013440  Hoch_4248  methylthioribulose-1-phosphate dehydratase  31.38 
 
 
226 aa  89  4e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.144051  normal 
 
 
-
 
NC_008312  Tery_4305  class II aldolase/adducin-like  29.5 
 
 
252 aa  85.1  7e-16  Trichodesmium erythraeum IMS101  Bacteria  hitchhiker  0.00261955  normal  0.128677 
 
 
-
 
NC_008309  HS_0014  putative aldolase  40.82 
 
 
210 aa  82  0.000000000000005  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0704  class II aldolase/adducin-like  28.89 
 
 
207 aa  81.6  0.000000000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  hitchhiker  0.0019609 
 
 
-
 
NC_013421  Pecwa_0110  putative aldolase  34.07 
 
 
218 aa  81.6  0.000000000000008  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3467  L-ribulose-5-phosphate 4-epimerase  29.41 
 
 
229 aa  80.9  0.00000000000001  Clostridium cellulolyticum H10  Bacteria  normal  0.443237  n/a   
 
 
-
 
NC_013093  Amir_0986  methylthioribulose-1-phosphate dehydratase  37.02 
 
 
206 aa  79.7  0.00000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0116  putative aldolase  33.52 
 
 
218 aa  79.7  0.00000000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04752  putative aldolase  32.6 
 
 
215 aa  79.3  0.00000000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_3402  class II aldolase/adducin family protein  32.8 
 
 
225 aa  78.2  0.00000000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.852747  normal 
 
 
-
 
NC_010525  Tneu_1346  class II aldolase/adducin family protein  40.82 
 
 
189 aa  77.4  0.0000000000001  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0532237  normal 
 
 
-
 
NC_010718  Nther_2109  class II aldolase/adducin family protein  32.65 
 
 
212 aa  77.4  0.0000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2736  L-ribulose-5-phosphate 4-epimerase  32.48 
 
 
228 aa  77  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011083  SeHA_C4806  L-ribulose-5-phosphate 4-epimerase  33.54 
 
 
228 aa  76.6  0.0000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.365152  normal 
 
 
-
 
NC_011313  VSAL_II0210  putative aldolase  32.04 
 
 
210 aa  76.3  0.0000000000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0434  class II aldolase/adducin family protein  29.53 
 
 
180 aa  76.3  0.0000000000003  Methanococcus maripaludis C7  Archaea  normal  0.192772  normal 
 
 
-
 
NC_013757  Gobs_1445  class II aldolase/adducin family protein  39.47 
 
 
208 aa  75.9  0.0000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2023  class II aldolase/adducin family protein  39.47 
 
 
208 aa  75.9  0.0000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0841682  n/a   
 
 
-
 
NC_011080  SNSL254_A3955  L-ribulose-5-phosphate 4-epimerase  31.63 
 
 
231 aa  75.9  0.0000000000004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0559727  normal  0.918987 
 
 
-
 
NC_013517  Sterm_0035  L-ribulose-5-phosphate 4-epimerase  29.94 
 
 
214 aa  75.1  0.0000000000007  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3891  L-ribulose-5-phosphate 4-epimerase  30.26 
 
 
231 aa  74.7  0.0000000000009  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4759  L-ribulose-5-phosphate 4-epimerase  32.92 
 
 
228 aa  74.7  0.000000000001  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4656  L-ribulose-5-phosphate 4-epimerase  32.92 
 
 
228 aa  74.3  0.000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4000  L-ribulose-5-phosphate 4-epimerase  30.26 
 
 
231 aa  74.3  0.000000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.747356  normal  0.850049 
 
 
-
 
NC_011205  SeD_A4062  L-ribulose-5-phosphate 4-epimerase  30.26 
 
 
231 aa  74.3  0.000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.612579 
 
 
-
 
NC_009972  Haur_4769  class II aldolase/adducin family protein  38.2 
 
 
227 aa  73.9  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3875  L-ribulose-5-phosphate 4-epimerase  30.26 
 
 
231 aa  73.2  0.000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E4728  L-ribulose-5-phosphate 4-epimerase  32.92 
 
 
228 aa  73.6  0.000000000002  Shigella boydii CDC 3083-94  Bacteria  normal  0.900627  n/a   
 
 
-
 
NC_011898  Ccel_1290  class II aldolase/adducin family protein  28.42 
 
 
265 aa  73.9  0.000000000002  Clostridium cellulolyticum H10  Bacteria  normal  0.984063  n/a   
 
 
-
 
NC_009253  Dred_2062  class II aldolase/adducin family protein  40.18 
 
 
219 aa  73.6  0.000000000002  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00000402268  n/a   
 
 
-
 
NC_009654  Mmwyl1_2551  putative aldolase  38.78 
 
 
210 aa  73.9  0.000000000002  Marinomonas sp. MWYL1  Bacteria  normal  0.189319  hitchhiker  0.00972731 
 
 
-
 
NC_012034  Athe_2580  class II aldolase/adducin family protein  26.88 
 
 
216 aa  72.8  0.000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000000288741  n/a   
 
 
-
 
NC_009975  MmarC6_1486  class II aldolase/adducin family protein  26.73 
 
 
190 aa  72.8  0.000000000003  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4442  L-ribulose-5-phosphate 4-epimerase  32.92 
 
 
228 aa  73.2  0.000000000003  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_0711  class II aldolase/adducin family protein  46.34 
 
 
222 aa  73.2  0.000000000003  Caldivirga maquilingensis IC-167  Archaea  hitchhiker  0.00125122  unclonable  2.5701e-17 
 
 
-
 
NC_011353  ECH74115_5714  L-ribulose-5-phosphate 4-epimerase  32.92 
 
 
228 aa  73.2  0.000000000003  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.792036  normal 
 
 
-
 
NC_009012  Cthe_0319  class II aldolase/adducin-like protein  27.66 
 
 
214 aa  72.8  0.000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.294023  n/a   
 
 
-
 
NC_013515  Smon_1319  L-ribulose-5-phosphate 4-epimerase  29.9 
 
 
231 aa  72.8  0.000000000003  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_0966  class II aldolase/adducin family protein  40 
 
 
217 aa  72.8  0.000000000004  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2271  class II aldolase/adducin-like  29.31 
 
 
197 aa  72  0.000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.453989  hitchhiker  0.000307852 
 
 
-
 
NC_009832  Spro_1490  putative aldolase  31.49 
 
 
210 aa  72  0.000000000006  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4482  class II aldolase/adducin-like  27.6 
 
 
220 aa  72  0.000000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0177289  normal 
 
 
-
 
NC_013757  Gobs_3384  class II aldolase/adducin family protein  40.91 
 
 
213 aa  71.2  0.000000000009  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3928  L-ribulose-5-phosphate 4-epimerase  29.44 
 
 
240 aa  70.9  0.00000000001  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.00000000124129  n/a   
 
 
-
 
NC_013947  Snas_1553  class II aldolase/adducin family protein  42.86 
 
 
204 aa  70.9  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0398  class II aldolase/adducin family protein  29.38 
 
 
214 aa  70.9  0.00000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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