9 homologs were found in PanDaTox collection
for query gene Tgr7_2015 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_2015  hypothetical protein  100 
 
 
458 aa  899    Thioalkalivibrio sp. HL-EbGR7  Bacteria  decreased coverage  0.00266925  n/a   
 
 
-
 
NC_013889  TK90_1727  hypothetical protein  24.26 
 
 
453 aa  61.6  0.00000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1634  hypothetical protein  23.01 
 
 
502 aa  48.5  0.0002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  unclonable  0.00065712  normal  0.987558 
 
 
-
 
NC_011149  SeAg_B1708  protein YdgA  23.01 
 
 
502 aa  48.5  0.0002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.366845  n/a   
 
 
-
 
NC_011094  SeSA_A1565  protein YdgA  23.01 
 
 
502 aa  48.5  0.0003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.402568  normal  0.107029 
 
 
-
 
NC_011205  SeD_A1877  hypothetical protein  23.01 
 
 
502 aa  48.5  0.0003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.710418  normal 
 
 
-
 
NC_011080  SNSL254_A1575  hypothetical protein  22.57 
 
 
502 aa  47.4  0.0006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.193495  normal  0.310503 
 
 
-
 
NC_013422  Hneap_1998  protein of unknown function DUF945  18.83 
 
 
445 aa  45.1  0.003  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2465  hypothetical protein  25.7 
 
 
448 aa  43.5  0.008  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>