More than 300 homologs were found in PanDaTox collection
for query gene Tcur_4741 on replicon NC_013510
Organism: Thermomonospora curvata DSM 43183



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013510  Tcur_4741  transcriptional regulator, PadR-like family  100 
 
 
116 aa  227  3e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3281  PadR family transcriptional regulator  81.13 
 
 
109 aa  174  4e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0735  PadR-like family transcriptional regulator  73.45 
 
 
111 aa  155  1e-37  Thermobispora bispora DSM 43833  Bacteria  normal  hitchhiker  0.0073319 
 
 
-
 
NC_013947  Snas_2928  transcriptional regulator, PadR-like family  69 
 
 
106 aa  135  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.425588  hitchhiker  0.00045831 
 
 
-
 
NC_013093  Amir_0778  transcriptional regulator, PadR-like family  66.02 
 
 
115 aa  128  2.0000000000000002e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8234  transcriptional regulator, PadR-like family  51.33 
 
 
123 aa  118  3e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4791  transcriptional regulator, PadR-like family  59.41 
 
 
113 aa  104  4e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0360  transcriptional regulator, PadR-like family  54.37 
 
 
107 aa  95.1  3e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0755  PadR family transcriptional regulator  43.64 
 
 
125 aa  91.7  3e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.916558  normal 
 
 
-
 
NC_008009  Acid345_4285  PadR family transcriptional regulator  45.54 
 
 
110 aa  87.8  5e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_5211  PadR family transcriptional regulator  36.89 
 
 
109 aa  83.6  8e-16  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5082  transcriptional regulator, PadR family  36.89 
 
 
109 aa  83.6  8e-16  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_5114  PadR family transcriptional regulator  36.89 
 
 
121 aa  83.6  9e-16  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4845  PadR family transcriptional regulator  37.62 
 
 
188 aa  83.6  9e-16  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_4626  PadR family transcriptional regulator  38.89 
 
 
114 aa  82.4  0.000000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.658032 
 
 
-
 
NC_008009  Acid345_0617  PadR family transcriptional regulator  40 
 
 
108 aa  78.6  0.00000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2897  PadR family transcriptional regulator  38.24 
 
 
113 aa  77.8  0.00000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.743193  normal 
 
 
-
 
NC_008009  Acid345_4394  PadR family transcriptional regulator  41.58 
 
 
119 aa  77  0.00000000000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2175  transcriptional regulator, PadR-like family  32.69 
 
 
114 aa  76.3  0.0000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000935551  normal  0.0245277 
 
 
-
 
NC_011898  Ccel_2935  transcriptional regulator, PadR-like family  34.21 
 
 
116 aa  75.9  0.0000000000002  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000047727  n/a   
 
 
-
 
NC_008009  Acid345_2046  PadR family transcriptional regulator  41.84 
 
 
109 aa  75.1  0.0000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3462  PadR family transcriptional regulator  39.29 
 
 
121 aa  74.7  0.0000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.00016944  hitchhiker  0.00778578 
 
 
-
 
NC_008009  Acid345_3472  PadR family transcriptional regulator  36.61 
 
 
120 aa  74.7  0.0000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0715346 
 
 
-
 
NC_008009  Acid345_1284  PadR family transcriptional regulator  39.18 
 
 
121 aa  74.3  0.0000000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.865226  normal 
 
 
-
 
NC_013521  Sked_12940  predicted transcriptional regulator  38.6 
 
 
128 aa  73.9  0.0000000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0699  PadR family transcriptional regulator  32.08 
 
 
110 aa  73.9  0.0000000000007  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000596024  n/a   
 
 
-
 
NC_008009  Acid345_1087  PadR family transcriptional regulator  43.43 
 
 
113 aa  73.9  0.0000000000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0408636 
 
 
-
 
NC_013440  Hoch_1993  transcriptional regulator, PadR-like family  41.3 
 
 
107 aa  73.2  0.000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.765293  normal  0.399206 
 
 
-
 
NC_013947  Snas_1117  transcriptional regulator, PadR-like family  39.81 
 
 
122 aa  73.2  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.742645 
 
 
-
 
NC_013204  Elen_1313  transcriptional regulator, PadR-like family  40 
 
 
113 aa  72  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.107904  normal  0.0202461 
 
 
-
 
NC_008531  LEUM_2026  PadR family transcriptional regulator  38.14 
 
 
102 aa  72  0.000000000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.000000771993  n/a   
 
 
-
 
NC_008531  LEUM_2045  PadR family transcriptional regulator  27.93 
 
 
116 aa  71.6  0.000000000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0961  transcriptional regulator, PadR-like family  32.69 
 
 
115 aa  72  0.000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2018  PadR-like family transcriptional regulator  29.13 
 
 
111 aa  70.9  0.000000000005  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0870  transcriptional regulator, PadR-like family  35.79 
 
 
109 aa  70.9  0.000000000005  Methanosphaerula palustris E1-9c  Archaea  normal  0.126206  normal 
 
 
-
 
NC_013739  Cwoe_0884  transcriptional regulator, PadR-like family  42.45 
 
 
113 aa  70.9  0.000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.803221  normal 
 
 
-
 
NC_014158  Tpau_3127  transcriptional regulator, PadR-like family  45.45 
 
 
128 aa  70.5  0.000000000007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.177743  n/a   
 
 
-
 
NC_009012  Cthe_1895  PadR family transcriptional regulator  32.69 
 
 
115 aa  70.5  0.000000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1408  transcriptional regulator, PadR-like family  39.39 
 
 
118 aa  70.5  0.000000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.364205  n/a   
 
 
-
 
NC_013730  Slin_3822  transcriptional regulator, PadR-like family  34.91 
 
 
114 aa  70.1  0.000000000009  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1857  PadR-like family transcriptional regulator  34.29 
 
 
109 aa  70.1  0.00000000001  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1068  transcriptional regulator, PadR family  32 
 
 
110 aa  70.1  0.00000000001  Bacillus cereus B4264  Bacteria  hitchhiker  0.00406829  n/a   
 
 
-
 
NC_009972  Haur_0735  PadR-like family transcriptional regulator  34.58 
 
 
111 aa  69.3  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1891  PadR family transcriptional regulator  36.54 
 
 
134 aa  68.9  0.00000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.240691  normal  0.0316492 
 
 
-
 
NC_011830  Dhaf_3375  transcriptional regulator, PadR-like family  33.67 
 
 
114 aa  69.3  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000695283  n/a   
 
 
-
 
NC_009921  Franean1_1641  PadR-like family transcriptional regulator  36.89 
 
 
130 aa  68.2  0.00000000003  Frankia sp. EAN1pec  Bacteria  normal  normal  0.103704 
 
 
-
 
NC_013172  Bfae_24890  predicted transcriptional regulator  38.46 
 
 
111 aa  68.2  0.00000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.134259  n/a   
 
 
-
 
NC_009513  Lreu_0318  PadR family transcriptional regulator  32.98 
 
 
110 aa  68.2  0.00000000004  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.490678  n/a   
 
 
-
 
NC_007644  Moth_2348  PadR family transcriptional regulator  35.35 
 
 
119 aa  67  0.00000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.14892 
 
 
-
 
NC_013172  Bfae_25120  predicted transcriptional regulator  46.32 
 
 
132 aa  67  0.00000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2223  PadR family transcriptional regulator  39.13 
 
 
372 aa  66.6  0.00000000009  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0957891  hitchhiker  0.0000188934 
 
 
-
 
NC_010184  BcerKBAB4_0950  PadR-like family transcriptional regulator  31 
 
 
110 aa  66.6  0.0000000001  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.0000000224962  n/a   
 
 
-
 
NC_008009  Acid345_3603  PadR family transcriptional regulator  40.45 
 
 
113 aa  66.2  0.0000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0899906 
 
 
-
 
NC_009664  Krad_2816  transcriptional regulator, PadR-like family  42.16 
 
 
121 aa  65.9  0.0000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.270433  normal  0.376795 
 
 
-
 
NC_013037  Dfer_5149  transcriptional regulator, PadR-like family  32.11 
 
 
117 aa  66.2  0.0000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0918525  normal 
 
 
-
 
NC_014150  Bmur_2081  transcriptional regulator, PadR-like family  28.97 
 
 
109 aa  65.5  0.0000000002  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000022052  n/a   
 
 
-
 
NC_008146  Mmcs_5217  PadR family transcriptional regulator  39.56 
 
 
118 aa  66.2  0.0000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5305  PadR family transcriptional regulator  39.56 
 
 
118 aa  66.2  0.0000000002  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1119  transcriptional regulator, PadR-like family  31.3 
 
 
123 aa  65.9  0.0000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000828793  n/a   
 
 
-
 
NC_009077  Mjls_5597  PadR family transcriptional regulator  39.56 
 
 
118 aa  66.2  0.0000000002  Mycobacterium sp. JLS  Bacteria  normal  0.459425  normal  0.499532 
 
 
-
 
NC_013730  Slin_6512  transcriptional regulator, PadR-like family  33.96 
 
 
114 aa  65.5  0.0000000003  Spirosoma linguale DSM 74  Bacteria  normal  0.299933  normal 
 
 
-
 
NC_010001  Cphy_3562  PadR-like family transcriptional regulator  31.43 
 
 
109 aa  65.1  0.0000000003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4304  hypothetical protein  37.61 
 
 
119 aa  64.7  0.0000000004  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1270  PadR-like family transcriptional regulator  32.99 
 
 
105 aa  64.3  0.0000000005  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000000169455  n/a   
 
 
-
 
NC_011365  Gdia_0204  transcriptional regulator, PadR-like family  33.33 
 
 
111 aa  64.3  0.0000000005  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.100896 
 
 
-
 
NC_010571  Oter_3153  PadR-like family transcriptional regulator  37.8 
 
 
85 aa  64.3  0.0000000005  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE1035  PadR family transcriptional regulator  34.95 
 
 
108 aa  64.3  0.0000000006  Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.00460025  n/a   
 
 
-
 
NC_009712  Mboo_0346  PadR-like family transcriptional regulator  34.65 
 
 
108 aa  63.9  0.0000000006  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_014210  Ndas_0742  transcriptional regulator, PadR-like family  37.76 
 
 
124 aa  63.9  0.0000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.238359  normal 
 
 
-
 
NC_011898  Ccel_0216  transcriptional regulator, PadR-like family  33.01 
 
 
109 aa  63.5  0.0000000008  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0595  transcriptional regulator, PadR-like family  30.84 
 
 
112 aa  63.5  0.0000000009  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_013204  Elen_1533  transcriptional regulator, PadR-like family  36.73 
 
 
120 aa  63.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.310263 
 
 
-
 
NC_009953  Sare_2975  PadR-like family transcriptional regulator  34.62 
 
 
117 aa  62.8  0.000000001  Salinispora arenicola CNS-205  Bacteria  normal  0.351973  hitchhiker  0.000108839 
 
 
-
 
NC_009720  Xaut_3967  PadR-like family transcriptional regulator  37.5 
 
 
152 aa  63.2  0.000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.641404 
 
 
-
 
NC_008148  Rxyl_2059  PadR family transcriptional regulator  38.75 
 
 
127 aa  62.8  0.000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5391  transcriptional regulator, PadR family  38.3 
 
 
115 aa  62.4  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0917422  normal  0.395452 
 
 
-
 
NC_013440  Hoch_3025  transcriptional regulator, PadR-like family  37.23 
 
 
112 aa  62.4  0.000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.361179  normal  0.13274 
 
 
-
 
NC_013530  Xcel_2678  transcriptional regulator, PadR-like family  39.39 
 
 
111 aa  62  0.000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3281  PadR-like family transcriptional regulator  41.41 
 
 
112 aa  60.8  0.000000005  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.206991 
 
 
-
 
NC_013521  Sked_05700  transcriptional regulator, PadR family  39.39 
 
 
114 aa  60.8  0.000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.182738  normal 
 
 
-
 
NC_014165  Tbis_3584  PadR-like family transcriptional regulator  41.41 
 
 
112 aa  60.8  0.000000005  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_1495  transcriptional regulator, PadR-like family  27.27 
 
 
108 aa  60.8  0.000000006  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3065  transcriptional regulator, PadR-like family  35.35 
 
 
136 aa  60.8  0.000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.599102  normal  0.802869 
 
 
-
 
NC_012791  Vapar_3585  transcriptional regulator, PadR-like family  38.82 
 
 
203 aa  60.5  0.000000007  Variovorax paradoxus S110  Bacteria  normal  0.785047  n/a   
 
 
-
 
NC_013131  Caci_5790  transcriptional regulator, PadR-like family  37.25 
 
 
128 aa  60.5  0.000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.120681  normal 
 
 
-
 
NC_011898  Ccel_1103  transcriptional regulator, PadR-like family  30.53 
 
 
118 aa  60.1  0.000000009  Clostridium cellulolyticum H10  Bacteria  normal  0.369684  n/a   
 
 
-
 
NC_008009  Acid345_3563  PadR family transcriptional regulator  37 
 
 
125 aa  60.5  0.000000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3121  transcriptional regulator, PadR-like family  44.05 
 
 
191 aa  60.1  0.000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2852  transcriptional regulator, PadR-like family  42.86 
 
 
191 aa  60.1  0.00000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.118488  normal 
 
 
-
 
NC_014210  Ndas_R0045  transcriptional regulator, PadR-like family  43 
 
 
110 aa  59.7  0.00000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1577  PadR-like family transcriptional regulator  40.91 
 
 
210 aa  60.1  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.63756 
 
 
-
 
NC_011830  Dhaf_2191  transcriptional regulator, PadR-like family  30.48 
 
 
115 aa  58.9  0.00000002  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  3.02647e-16  n/a   
 
 
-
 
NC_013595  Sros_4588  transcriptional regulator, PadR-like family  41.41 
 
 
125 aa  58.9  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00658109  normal  0.0547899 
 
 
-
 
NC_013132  Cpin_2396  transcriptional regulator, PadR-like family  24.3 
 
 
111 aa  58.9  0.00000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.109028  normal  0.171865 
 
 
-
 
NC_002976  SERP1934  PadR family transcriptional regulator  29.29 
 
 
106 aa  58.5  0.00000003  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2076  transcriptional regulator, PadR-like family  34.31 
 
 
126 aa  58.2  0.00000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.668384  n/a   
 
 
-
 
NC_010718  Nther_0964  transcriptional regulator, PadR-like family  29.59 
 
 
121 aa  58.2  0.00000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  unclonable  0.0000000000000310235  normal 
 
 
-
 
NC_008527  LACR_0345  PadR family transcriptional regulator  31.25 
 
 
116 aa  58.5  0.00000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  unclonable  0.00000392744  n/a   
 
 
-
 
NC_009052  Sbal_3696  PadR-like family transcriptional regulator  34.12 
 
 
128 aa  58.5  0.00000003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2527  PadR-like family transcriptional regulator  37.8 
 
 
117 aa  58.2  0.00000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0218249  n/a   
 
 
-
 
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