18 homologs were found in PanDaTox collection
for query gene Tbd_0648 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007404  Tbd_0648  hypothetical protein  100 
 
 
68 aa  137  3e-32  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_0211  hypothetical protein  54.1 
 
 
79 aa  58.2  0.00000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.334507  normal 
 
 
-
 
NC_008340  Mlg_1384  hypothetical protein  39.74 
 
 
106 aa  44.7  0.0004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.958099  normal  0.904414 
 
 
-
 
NC_007644  Moth_0713  hypothetical protein  36 
 
 
76 aa  43.9  0.0008  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.000000000000015115  normal  0.0462479 
 
 
-
 
NC_007520  Tcr_1579  hypothetical protein  35.21 
 
 
74 aa  43.5  0.0009  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2065  hypothetical protein  57.14 
 
 
87 aa  43.5  0.0009  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.66458  normal 
 
 
-
 
NC_011761  AFE_2438  hypothetical protein  57.14 
 
 
94 aa  43.5  0.001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.386115  n/a   
 
 
-
 
NC_011761  AFE_1333  hypothetical protein  38.89 
 
 
126 aa  42.4  0.002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.280525  n/a   
 
 
-
 
NC_007404  Tbd_2741  hypothetical protein  38.16 
 
 
78 aa  42  0.003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.389873  normal 
 
 
-
 
NC_011206  Lferr_0168  hypothetical protein  47.06 
 
 
87 aa  42  0.003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0430  hypothetical protein  34.18 
 
 
121 aa  41.2  0.004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0219  hypothetical protein  36.11 
 
 
148 aa  41.6  0.004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_1109  hypothetical protein  39.29 
 
 
75 aa  41.2  0.005  Petrotoga mobilis SJ95  Bacteria  normal  0.0251692  n/a   
 
 
-
 
NC_007520  Tcr_2112  hypothetical protein  41.43 
 
 
74 aa  41.2  0.005  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1577  hypothetical protein  41.43 
 
 
74 aa  41.2  0.005  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1380  hypothetical protein  33.82 
 
 
76 aa  41.2  0.005  Rhodothermus marinus DSM 4252  Bacteria  normal  0.480252  n/a   
 
 
-
 
NC_009253  Dred_2978  hypothetical protein  39.66 
 
 
59 aa  40.4  0.008  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0906  hypothetical protein  38.1 
 
 
120 aa  40.4  0.009  Methanosaeta thermophila PT  Archaea  decreased coverage  0.000104891  n/a   
 
 
-
 
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