7 homologs were found in PanDaTox collection
for query gene TM1040_3816 on replicon NC_008042
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008042  TM1040_3816  hypothetical protein  100 
 
 		 269 aa  524  1e-148  Ruegeria sp. TM1040  Bacteria  normal  0.538291  normal  0.123124 
 
 
-
 
NC_009957  Dshi_3979  hypothetical protein  96.65 
 
 		 269 aa  510  1e-144  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.869571  n/a   
 
 
-
 
NC_009955  Dshi_3644  hypothetical protein  97.4 
 
 		 269 aa  509  1e-143  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.065926 
 
 
-
 
NC_008242  Meso_4345  type IV secretion system  25.74 
 
 		 231 aa  54.3  0.000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0678  P-type DNA transfer protein VirB5  23.26 
 
 		 232 aa  50.8  0.00002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.511281  n/a   
 
 
-
 
NC_009475  BBta_p0254  Type IV secretory pathway AvhB5 protein  27.17 
 
 		 240 aa  46.6  0.0004  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  1 
 
 
-
 
NC_012792  Vapar_5817  type IV secretion system family protein  24.44 
 
 		 244 aa  44.7  0.002  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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