5 homologs were found in PanDaTox collection
for query gene TM1040_3544 on replicon NC_008043
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008043  TM1040_3544  putative transcriptional regulator  100 
 
 		 134 aa  275  2e-73  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.473162 
 
 
-
 
NC_008340  Mlg_0638  phage transcriptional regulator, AlpA  39.22 
 
 		 66 aa  51.2  0.000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.0720576 
 
 
-
 
NC_009675  Anae109_1081  phage transcriptional regulator, AlpA  40.35 
 
 		 82 aa  43.5  0.001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_2004  transcriptional regulator  36.17 
 
 		 68 aa  41.6  0.004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_3394  hypothetical protein  35.09 
 
 		 84 aa  41.2  0.005  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
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